> Tigger transposable element derived 1 (TIGD1)
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UGID:164434     UniGene Hs.211823     Homo sapiens (human)   TIGD1 Order cDNA clone, Links
Tigger transposable element derived 1 (TIGD1)

Human protein-coding gene TIGD1. Represented by 56 ESTs from 30 cDNA libraries. EST representation biased toward pancreatic tumor. Corresponds to reference sequence NM_145702.1. [UniGene 164434 - Hs.211823]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_663748.1 TIGD1 gene product H. sapiens 97.0 135

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: pancreatic tumor [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: pancreas; brain; skin; uncharacterized tissue; thymus; spleen; testis; mixed; blood; kidney; prostate; lung; muscle; lymph node; embryonic tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2q37.1
UniSTS entry: Chr 3 RH69349
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

BC063500.1 Homo sapiens tigger transposable element derived 1, mRNA (cDNA clone MGC:74576 IMAGE:5248661), complete cds A
AK056329.1 Homo sapiens cDNA FLJ31767 fis, clone NT2RI2007884, weakly similar to ARS BINDING PROTEIN 1
NM_145702.1 Homo sapiens tigger transposable element derived 1 (TIGD1), mRNA
BC035143.1 Homo sapiens tigger transposable element derived 1, mRNA (cDNA clone MGC:43254 IMAGE:5264460), complete cds A

EST sequences (56)

BX477390.1 Clone DKFZp686D12194 muscle 5' read
BX477389.1 Clone DKFZp686D10194 muscle 5' read
BX482606.1 Clone DKFZp686K09231 muscle 5' read
CN419416.1 embryonic tissue 5' read
BE247232.1 Clone TCBAP3842 lymph node
BP194785.1 Clone ADB06088 brain 5' read
BP292042.1 Clone LNG03112 lung 5' read
DN989942.1 Clone TC100272 brain 5' read
DA274802.1 Clone BRCOC2001283 brain 5' read
DA164652.1 Clone BRAMY2025504 brain 5' read
BF678543.1 Clone IMAGE:4250209 prostate 5' read
DA088769.1 Clone BRACE2044012 brain 5' read
DA263036.1 Clone BRCAN2015646 brain 5' read
DA616239.1 Clone IMR322015640 brain 5' read
DA364516.1 Clone BRSTN2011844 brain 5' read
DA635424.1 Clone KIDNE2017496 kidney 5' read
DA380046.1 Clone BRTHA2013098 brain 5' read
DA485915.1 Clone FCBBF2003149 brain 5' read
DA677318.1 Clone NETRP2008556 blood 5' read
DA572134.1 Clone HEMBB1000587 mixed 5' read
DA384842.1 Clone BRTHA2019613 brain 5' read
DA773656.1 Clone OCBBF2007169 brain 5' read
DA704533.1 Clone NT2RI2007884 5' read
DA752526.1 Clone NT2RP7018578 testis 5' read
DA746777.1 Clone NT2RP7011858 testis 5' read
DA953590.1 Clone SPLEN2031594 spleen 5' read
DB108327.1 Clone THYMU2010612 thymus 5' read
BF979716.1 Clone IMAGE:4374163 testis 5' read
AL521708.3 Clone CS0DB003YF15 uncharacterized tissue 5' read
N33819.1 Clone IMAGE:267367 skin 5' read
BI461894.1 Clone IMAGE:5270237 testis 5' read
BI553487.1 Clone IMAGE:5264460 brain 5' read
BI913386.1 Clone IMAGE:5243274 brain 5' read
BI915333.1 Clone IMAGE:5248661 brain 5' read
BQ685263.1 Clone IMAGE:6209991 pancreas 5' read P
BQ685449.1 Clone IMAGE:6208273 pancreas 5' read P
BQ685969.1 Clone IMAGE:6247735 pancreas 5' read P
BQ686563.1 Clone IMAGE:6206797 pancreas 5' read
BQ686807.1 Clone IMAGE:6248436 pancreas 5' read P
BQ686929.1 Clone IMAGE:6248594 pancreas 5' read
BQ687268.1 Clone IMAGE:6208217 pancreas 5' read P
BQ687669.1 Clone IMAGE:6250814 pancreas 5' read
BQ688350.1 Clone IMAGE:6206682 pancreas 5' read P
BQ688705.1 Clone IMAGE:6248909 pancreas 5' read P
BQ688928.1 Clone IMAGE:6209257 pancreas 5' read P
BQ690237.1 Clone IMAGE:6251036 pancreas 5' read P
BQ691071.1 Clone IMAGE:6206811 pancreas 5' read P
BQ890432.1 Clone IMAGE:6207690 pancreas 5' read P
BQ894838.1 Clone IMAGE:6083431 pancreas 5' read P
BQ899110.1 Clone IMAGE:6083240 pancreas 5' read
BU157836.1 Clone IMAGE:6085294 pancreas 5' read
BU168996.1 Clone IMAGE:6081604 pancreas 5' read
BU179724.1 Clone IMAGE:5952203 pancreas 5' read
BU185489.1 Clone IMAGE:6084418 pancreas 5' read
BU185766.1 Clone IMAGE:6085331 pancreas 5' read
BU587905.1 Clone IMAGE:6385964 mixed 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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