> SLIT-ROBO Rho GTPase activating protein 1 (SRGAP1)
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UGID:164116     UniGene Hs.210751     Homo sapiens (human)   SRGAP1 Order cDNA clone, Links
SLIT-ROBO Rho GTPase activating protein 1 (SRGAP1)

Human protein-coding gene SRGAP1. Represented by 221 ESTs from 117 cDNA libraries. Corresponds to reference sequence NM_020762.2. [UniGene 164116 - Hs.210751]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_509190.2 PREDICTED: SLIT-ROBO Rho GTPase-activating protein 1 isoform 3 P. troglodytes 100.0 1084
NP_065813.1 SRGAP1 gene product H. sapiens 100.0 1084
XP_001116844.1 PREDICTED: SLIT-ROBO Rho GTPase-activating protein 1-like isoform 2 M. mulatta 100.0 1082
XP_003906765.1 PREDICTED: SLIT-ROBO Rho GTPase-activating protein 1-like isoform 1 P. anubis 99.9 919
XP_538265.3 PREDICTED: SLIT-ROBO Rho GTPase-activating protein 1 C. lupus familiaris 99.5 1084
XP_001491726.1 PREDICTED: SLIT-ROBO Rho GTPase-activating protein 1 E. caballus 99.5 1084
NP_001074506.1 Srgap1 gene product M. musculus 98.7 1084
NP_001025266.1 SLIT-ROBO Rho GTPase-activating protein 1 D. rerio 76.9 1034
NP_001087899.1 SLIT-ROBO Rho GTPase activating protein 2 X. laevis 69.3 1025
Other hits (2 of 25) [Show all]SpeciesId(%)Len(aa)
XP_003355553.2 PREDICTED: SLIT-ROBO Rho GTPase-activating protein 1, partial S. scrofa 99.5 942
XP_002711354.1 PREDICTED: SLIT-ROBO Rho GTPase activating protein 1-like O. cuniculus 99.5 1084

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; skin; mixed; kidney; stomach; lung; uncharacterized tissue; thyroid; mouth; lymph node; liver; testis; muscle; connective tissue; vascular; trachea; epididymis; amniotic fluid; placenta; heart; eye; prostate; intestine; embryonic tissue; pancreas; uterus; ascites; bladder; mammary gland; bone; ovary; spleen; nerve; bone marrow
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12q14.2
UniSTS entry: Chr 12 A004M33
UniSTS entry: Chr 12 RH44473
UniSTS entry: Chr 12 RH44524
UniSTS entry: Chr 12 RH80302
UniSTS entry: D12S1232E
UniSTS entry: Chr 12 RH68563
UniSTS entry: Chr 19 GDB:451601
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

BC053903.1 Homo sapiens SLIT-ROBO Rho GTPase activating protein 1, mRNA (cDNA clone MGC:61613 IMAGE:6526787), complete cds PA
NM_020762.2 Homo sapiens SLIT-ROBO Rho GTPase activating protein 1 (SRGAP1), mRNA PA
AK023899.1 Homo sapiens cDNA FLJ13837 fis, clone THYRO1000748 P
AK025819.1 Homo sapiens cDNA: FLJ22166 fis, clone HRC00480 PA
BC029919.1 Homo sapiens SLIT-ROBO Rho GTPase activating protein 1, mRNA (cDNA clone IMAGE:4153945) PA
BC006127.1 Homo sapiens, clone IMAGE:3604678, mRNA A
AF113686.1 Homo sapiens clone FLB4231 P

EST sequences (221)

AI056313.1 Clone IMAGE:1669002 brain 3' read A
R20485.1 Clone IMAGE:35840 brain 5' read
BX102747.1 Clone IMAGp998C06119_;_IMAGE:123581 mixed
AI205818.1 Clone IMAGE:1836986 testis 3' read
AI208068.1 Clone IMAGE:1838189 testis 3' read
AI216583.1 Clone IMAGE:1884494 lung 3' read A
AI216876.1 Clone IMAGE:1840340 testis 3' read A
AI221836.1 Clone IMAGE:1843843 mixed 3' read
CB119832.1 Clone L8SCK0-38-B01 liver 5' read
AI276032.1 Clone IMAGE:1877564 mixed 3' read
CB104635.1 Clone S5SNU484-17-F08 stomach 5' read
AI299648.1 Clone IMAGE:1898014 lung 3' read A
AI337151.1 Clone IMAGE:2009091 uncharacterized tissue 3' read
AI382989.1 Clone IMAGE:2064512 mixed 3' read
AI424014.1 Clone IMAGE:2098859 brain 3' read P
AI436279.1 Clone IMAGE:2125033 mixed 3' read
AI436757.1 Clone IMAGE:2124692 mixed 3' read
AI566258.1 Clone IMAGE:2214157 lung 3' read
AI570682.1 Clone IMAGE:2164354 brain 3' read
AI598011.1 Clone IMAGE:2227703 pancreas 3' read
AI655770.1 Clone IMAGE:2243190 uncharacterized tissue 3' read
R45308.1 Clone IMAGE:35840 brain 3' read
AI700092.1 Clone IMAGE:2242974 uncharacterized tissue 3' read
AI804108.1 Clone IMAGE:2069761 mixed 3' read
AI914442.1 Clone IMAGE:2331451 mixed 3' read
AI868542.1 Clone IMAGE:2070316 mixed 3' read
BX461229.2 Clone CS0DF024YI21 brain 5' read
BX452110.1 Clone CS0DF024YI21 brain 5' read
CD386329.1 embryonic tissue 5' read P
AW002449.1 Clone IMAGE:2516062 uncharacterized tissue 3' read
AW003927.1 Clone IMAGE:2478742 uncharacterized tissue 3' read
CD580380.2 Clone IMAGp998E06514 brain 5' read P
CD656207.1 Clone IMAGE:30423192 embryonic tissue 5' read
BX491520.1 Clone DKFZp686O0898 muscle 5' read
BX504557.1 Clone DKFZp686C14141 muscle 5' read P
AW044249.1 Clone IMAGE:2553954 mixed 3' read A
AW067948.1 Clone NHTBC_cn22g01 bone P
AW090669.1 Clone IMAGE:2591181 brain 3' read P
CF126815.1 Clone IMAGE:30559112 lung 5' read
CF141667.1 Clone IMAGE:3099420 prostate 5' read
Z45072.1 Clone c-2ga03 brain P
F03989.1 Clone c-2ga03 brain 3' read
AI114513.1 liver P
AW168000.1 Clone IMAGE:2632536 uterus 3' read
AW263235.1 Clone IMAGE:2700706 mixed 3' read P
AW341337.1 Clone IMAGE:2872233 lung 3' read
CF786063.1 Clone IMAGE:30708857 mixed 5' read
AW816535.1 stomach
CK902898.1 Clone IMAGE:6218771 pancreas 3' read P
CK902899.1 Clone IMAGE:6218771 pancreas 5' read A
AW850178.1 intestine
AW850233.1 intestine
AW850445.1 intestine
AW850446.1 intestine
AW937362.1 kidney
AW937363.1 kidney
AW937437.1 kidney
AW937449.1 kidney
CN291160.1 embryonic tissue 5' read
AW958157.1 uncharacterized tissue
CN358783.1 embryonic tissue 5' read
AW965511.1 uncharacterized tissue
AW973760.1 uncharacterized tissue P
CO248392.1 Clone IMAGE:30925100 lung 5' read
H16264.1 Clone IMAGE:47862 brain 3' read
H16464.1 Clone IMAGE:47862 brain 5' read P
BE176953.1 thyroid
BE219363.1 Clone IMAGE:3176983 lung 3' read
CV030293.1 mixed 5' read P
BE389802.1 Clone IMAGE:3604678 uterus 5' read
BP395878.1 Clone hbt07537 pancreas 3' read
BE727183.1 Clone IMAGE:3832765 skin 5' read
BE727904.1 Clone IMAGE:3829972 skin 5' read
BE728003.1 Clone IMAGE:3830539 skin 5' read
DR000178.1 Clone TC112498 brain 5' read P
BE855920.1 Clone IMAGE:3305709 brain 3' read P
BF090397.1 brain P
BF125452.1 Clone IMAGE:4026356 skin 5' read
BF345189.1 Clone IMAGE:4153945 brain 5' read
BF351150.1 thyroid
BF358432.1 lung
H61273.1 Clone IMAGE:236277 ovary 5' read
H63285.1 Clone IMAGE:208616 mixed 5' read
AA837234.1 Clone IMAGE:1373193 ovary
AA837264.1 Clone IMAGE:1369045 lymph node P
H63725.1 Clone IMAGE:208616 mixed 3' read
DA163351.1 Clone BRAMY2023943 brain 5' read
DA167909.1 Clone BRAMY2029492 brain 5' read
DA503418.1 Clone FCBBF3018283 brain 5' read
DA695728.1 Clone NT2NE2016506 5' read P
DA434792.1 Clone CTONG2001332 mouth 5' read P
DA436661.1 Clone CTONG2003690 mouth 5' read
DA446550.1 Clone CTONG2017602 mouth 5' read
DA570140.1 Clone HEMBA1004184 embryonic tissue 5' read
AU141524.1 Clone THYRO1000748 thyroid 5' read P
DA526946.1 Clone FEBRA2018934 brain 5' read
DA500683.1 Clone FCBBF3014707 brain 5' read P
DA351943.1 Clone BRSSN2015062 brain 5' read
DA954048.1 Clone SPLEN2032201 spleen 5' read P
DA810925.1 Clone OCBBF3027697 brain 5' read P
DA988237.1 Clone SYNOV2021944 connective tissue 5' read
DA773723.1 Clone OCBBF2007255 brain 5' read
AU159063.2 Clone THYRO1000748 thyroid 3' read
DA782617.1 Clone OCBBF2018486 brain 5' read
DA888085.1 Clone PUAEN2008730 vascular 5' read P
DA777943.1 Clone OCBBF2012480 brain 5' read
BF530783.1 Clone IMAGE:4214982 brain 5' read
DA779871.1 Clone OCBBF2014911 brain 5' read P
DA792387.1 Clone OCBBF2031835 brain 5' read
DA786046.1 Clone OCBBF2023014 brain 5' read P
BF508615.1 Clone IMAGE:3085644 uncharacterized tissue 3' read A
DA794847.1 Clone OCBBF2035382 brain 5' read P
DA800718.1 Clone OCBBF3004753 brain 5' read P
BF569832.1 Clone IMAGE:4309939 kidney 5' read
BF570233.1 Clone IMAGE:4310143 kidney 3' read
BF570340.1 Clone IMAGE:4309939 kidney 3' read
BF591594.1 Clone IMAGE:3568081 lung 3' read
DA796949.1 Clone OCBBF2038355 brain 5' read
BF733602.1 amniotic fluid
DB237744.1 Clone TRACH3033511 trachea 5' read P
DB291620.1 Clone UTERU3022065 uterus 5' read
DB318277.1 Clone HCASM2009405 vascular 3' read
DB326244.1 Clone OCBBF2016611 brain 3' read
DB066893.1 Clone TESTI4008358 testis 5' read
BF770473.1 epididymis P
DW439504.1 liver
DW441473.1 liver
BF839812.1 mouth
BG149593.1 Clone IMAGE:3366819 lung 3' read
BG250947.1 Clone IMAGE:4471556 liver 5' read
T35541.1 lung 5' read P
N41458.1 Clone IMAGE:270262 skin 5' read
BG477171.1 Clone IMAGE:4643095 skin 5' read
BG478378.1 Clone IMAGE:4642060 skin 5' read
BG491938.1 Clone IMAGE:4685053 skin 3' read
D81915.1 Clone GEN-422C02 brain 5' read
BG186628.1 connective tissue P
BG197325.1 connective tissue P
BG220740.1 connective tissue PA
BI092019.1 Clone IMAGE:4997932 placenta 5' read P
BI047852.1 stomach
BI003564.1 thyroid
BI004817.1 thyroid P
BI009312.1 kidney P
BI009840.1 kidney P
N89290.1 Clone K8900 heart 5' read
BI918249.1 Clone IMAGE:5247053 brain 5' read
BM683453.1 Clone UI-E-EO1-ajb-e-11-0-UI eye 3' read A
BM688151.1 Clone UI-E-CL0-abx-f-03-0-UI eye 5' read
BM709755.1 Clone UI-E-CK1-aga-o-24-0-UI eye 5' read
BM718396.1 Clone UI-E-EO1-ajb-e-11-0-UI eye 5' read
BM723902.1 Clone UI-E-EO1-aix-b-22-0-UI eye 5' read
BM750472.1 Clone S9SNU601-29-A01 ascites 5' read A
BM785580.1 Clone S9SNU601-31-A08 ascites 5' read A
BM912471.1 Clone IMAGE:5474012 skin 5' read P
AL698443.1 Clone DKFZp686L10108 muscle 5' read P
BQ181957.1 Clone IMAGE:5854460 connective tissue 3' read A
BQ300240.1 bladder P
BQ310460.1 mammary gland
BQ310528.1 mammary gland
BQ327803.1 kidney P
BQ327804.1 kidney P
BQ327896.1 kidney P
BQ327920.1 kidney P
BQ327928.1 kidney P
BQ327984.1 kidney P
BQ327997.1 kidney P
BQ328000.1 kidney P
BQ436948.1 Clone IMAGE:6062384 skin 5' read
BQ637888.1 Clone hd15g12 eye 5' read
BQ644930.1 Clone IMAGE:6299112 liver 5' read
BQ652765.1 Clone IMAGE:6299088 liver 5' read
BQ677021.1 Clone IMAGE:6273716 skin 5' read
BQ677271.1 Clone IMAGE:6295172 skin 5' read
BQ678858.1 Clone IMAGE:6265401 skin 5' read A
BQ681657.1 Clone IMAGE:6294377 skin 5' read
BQ682134.1 Clone IMAGE:6260454 skin 5' read
BQ682496.1 Clone IMAGE:6214013 skin 5' read A
BQ682963.1 Clone IMAGE:6260303 skin 5' read
BQ684686.1 Clone IMAGE:6214083 skin 5' read
BQ716402.1 Clone IMAGE:6194490 nerve 5' read
BQ774026.1 Clone UI-H-FH0-bce-c-18-0-UI bone 3' read A
BF929949.1 brain
BQ888398.1 Clone IMAGE:6087455 skin 5' read A
BQ888537.1 Clone IMAGE:6089525 skin 5' read A
AA056588.1 Clone IMAGE:509546 intestine 3' read
AA056493.1 Clone IMAGE:509546 intestine 5' read
BU155195.1 Clone IMAGE:6147547 skin 5' read P
BU171695.1 Clone IMAGE:6148559 skin 5' read
BU520980.1 Clone IMAGE:6526787 uterus 5' read P
BU157782.1 Clone IMAGE:6266225 skin 5' read A
BU179968.1 Clone IMAGE:6252852 skin 5' read A
BU194432.1 Clone IMAGE:6106386 skin 5' read A
BU196769.1 Clone IMAGE:6253613 skin 5' read
W26296.1 eye
FN172798.1 Clone 297599_1889_3106
FN161000.1 Clone 266651_3855_3877
BU597394.1 Clone IMAGE:6454236 mixed 5' read
BU620696.1 Clone UI-H-FL1-bfx-b-07-0-UI bone 3' read A
BU726920.1 Clone UI-E-CL0-abx-f-03-0-UI eye 3' read A
BU733713.1 Clone UI-E-CK1-aga-o-24-0-UI eye 3' read A
AA243220.1 Clone IMAGE:664566 testis 3' read
HY055401.1 Clone H04D196C02 testis P
HY243497.1 Clone H04D196C02 testis
CA420078.1 Clone UI-H-FH0-bco-g-21-0-UI bone 3' read A
CA455455.1 Clone IMAGE:6739571 mixed 5' read A
CA489406.1 Clone IMAGE:6721833 mixed 5' read P
AA335019.1 epididymis 5' read
AA343746.1 liver 5' read
CA840949.1 Clone IMAGE:6218771 pancreas 3' read
CA841207.1 Clone IMAGE:6218771 pancreas 5' read P
AA420730.1 Clone IMAGE:745913 prostate
AA456650.1 Clone IMAGE:811973 mixed 3' read
T89352.1 Clone IMAGE:110039 mixed 3' read
AA578077.1 Clone IMAGE:1042417 bone marrow P
AA622046.1 Clone IMAGE:1144724 intestine 3' read
AA775832.1 Clone IMAGE:878510 brain 3' read
AA829010.1 Clone IMAGE:1373963 ovary
R10974.1 Clone IMAGE:129114 mixed 5' read
R10975.1 Clone IMAGE:129114 mixed 3' read
R12297.1 Clone IMAGE:25382 brain 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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