> Fanconi anemia, complementation group D2 (FANCD2)
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UGID:163580     UniGene Hs.208388     Homo sapiens (human)   FANCD2 Links
Fanconi anemia, complementation group D2 (FANCD2)

Human protein-coding gene FANCD2. Represented by 123 ESTs from 73 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 163580 - Hs.208388]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_149075.2 FANCD2 gene product H. sapiens 100.0 1470
NP_001028416.2 Fancd2 gene product M. musculus 79.2 1449
NP_001089160.1 Fanconi anemia, complementation group D2 X. laevis 63.0 1442
NP_958498.1 fancd2 gene product D. rerio 58.5 1444
Other hits (2 of 23) [Show all]SpeciesId(%)Len(aa)
XP_003309761.1 PREDICTED: Fanconi anemia group D2 protein P. troglodytes 99.5 1468
XP_003919188.1 PREDICTED: Fanconi anemia group D2 protein-like isoform 2 P. anubis 97.8 916

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; testis; mammary gland; embryonic tissue; brain; mixed; stomach; kidney; intestine; vascular; eye; ovary; lung; bone marrow; placenta; lymph; thymus; liver; blood; prostate; connective tissue; bone; thyroid; lymph node; ascites
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3p26
UniSTS entry: Chr 3 SHGC-76704 [Map Viewer]
UniSTS entry: Chr 3 RH92698
UniSTS entry: Chr 1 D11S2921
UniSTS entry: Chr 3 SGC34603 [Map Viewer]
UniSTS entry: Chr 1 D16S325
UniSTS entry: Chr 1 D8S2278
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

NM_001018115.1 Homo sapiens Fanconi anemia, complementation group D2 (FANCD2), transcript variant 2, mRNA PA
AF340183.1 Homo sapiens Fanconi anemia complementation group D2 protein (FANCD2) mRNA, complete cds, alternatively spliced P
NM_033084.3 Homo sapiens Fanconi anemia, complementation group D2 (FANCD2), transcript variant 1, mRNA P
AF230336.1 Homo sapiens Fanconi anemia complementation group D2 protein (FANCD2) mRNA, complete cds P
AK307512.1 Homo sapiens cDNA, FLJ97460 P
AK074406.1 Homo sapiens cDNA FLJ23826 fis, clone HUV00813, highly similar to Homo sapiens Fanconi anemia complementation group D2 protein (FANCD2) mRNA PA
AL832427.1 Homo sapiens mRNA; cDNA DKFZp762A223 (from clone DKFZp762A223) PA
AK022613.1 Homo sapiens cDNA FLJ12551 fis, clone NT2RM4000700 P
BC013582.2 Homo sapiens Fanconi anemia, complementation group D2, mRNA (cDNA clone IMAGE:3876190), complete cds PA
BC038666.1 Homo sapiens cDNA clone IMAGE:5268117, containing frame-shift errors PA

EST sequences (123)

AA974322.1 Clone IMAGE:1585968 uncharacterized tissue 3' read
CB146712.1 Clone L16HLK3-6-B08 liver 5' read P
AI418483.1 Clone IMAGE:2112025 mixed 3' read A
AI656012.1 Clone IMAGE:2243464 uncharacterized tissue 3' read PA
AI686403.1 Clone IMAGE:2253644 prostate 3' read P
AL046580.1 Clone DKFZp434K168 testis 5' read
AI916071.1 Clone IMAGE:2393170 intestine 3' read P
BX432942.2 Clone CS0DA003YP20 uncharacterized tissue 3' read P
BX432943.2 Clone CS0DA003YP20 uncharacterized tissue 3' read P
AI953711.1 Clone IMAGE:2474423 uncharacterized tissue 3' read P
CD171848.1 Clone IMAGE:30378962 testis 5' read P
BX451845.2 Clone CS0DA003YP20 uncharacterized tissue 5' read P
AI971037.1 Clone IMAGE:2488501 prostate 3' read P
AW015860.1 Clone IMAGE:2709850 uncharacterized tissue 3' read PA
CD643584.1 Clone IMAGE:30425068 embryonic tissue 5' read
T03160.1 Clone FB26F2 brain 3' read A
AW089025.1 Clone IMAGE:2595680 ovary 3' read
AW390353.1 stomach P
AW590391.1 Clone IMAGE:2948446 uncharacterized tissue 3' read PA
AW809381.1 stomach
AW809604.1 stomach
AW821120.1 stomach P
AW821133.1 stomach P
BX955958.1 Clone DKFZp781A1375 uncharacterized tissue 5' read
BX956311.1 Clone DKFZp781M2177 uncharacterized tissue 5' read P
CN264098.1 embryonic tissue 5' read
CN313735.1 embryonic tissue 5' read
CN334536.1 embryonic tissue 5' read P
CN334537.1 embryonic tissue 5' read
CN335846.1 embryonic tissue 5' read P
CN346704.1 embryonic tissue 5' read P
CN346705.1 embryonic tissue 5' read P
BE046901.1 Clone IMAGE:2916957 uncharacterized tissue 3' read P
H21679.1 Clone IMAGE:160102 mammary gland 5' read
H21680.1 Clone IMAGE:160102 mammary gland 3' read P
CR748807.1 Clone IMAGp998H131073_;_IMAGE:454332 uncharacterized tissue 5' read
BP244292.1 Clone HKR00268 kidney 5' read P
BP246929.1 Clone HKR07264 kidney 5' read P
BP247018.1 Clone HKR07449 kidney 5' read P
BP247731.1 Clone HKR09185 kidney 5' read P
BP247900.1 Clone HKR09592 kidney 5' read P
BP247944.1 Clone HKR09691 kidney 5' read P
BP248646.1 Clone HKR11537 kidney 5' read P
BP234680.1 Clone HCR03470 vascular 5' read P
BP312515.1 Clone OFR00430 mammary gland 5' read P
BP314986.1 Clone OFR07555 mammary gland 5' read P
BP363824.1 Clone TIR02573 lung 5' read P
BP280965.1 Clone KGR09316 brain 5' read P
BP282321.1 Clone KMR03858 bone marrow 5' read P
BP335784.1 Clone SMR03519 vascular 5' read P
BP337389.1 Clone SMR08260 vascular 5' read P
BE619536.1 Clone IMAGE:3876190 lung 5' read P
BE708584.1 thyroid
R92899.1 Clone IMAGE:275634 mixed 5' read
BE927755.1 intestine
BE927757.1 intestine
BE927763.1 intestine
R94840.1 Clone IMAGE:275634 mixed 3' read A
R94933.1 Clone IMAGE:198202 mixed 3' read
AU124890.1 Clone NT2RM4000700 testis 5' read P
AU128927.2 Clone NT2RP2004484 testis 5' read P
BY798073.2 Clone HE3132.seq eye 5' read
BF224011.1 Clone IMAGE:3700389 uncharacterized tissue 3' read P
BF330841.1 mammary gland
DA666764.1 Clone NCRRP2000015 uncharacterized tissue 5' read P
DA610450.1 Clone IMR322008323 brain 5' read P
AU148668.2 Clone NT2RM4000700 testis 3' read P
DA501710.1 Clone FCBBF3016059 brain 5' read P
DA909576.1 Clone SKNSH2002193 brain 5' read P
DA734037.1 Clone NT2RP2004280 testis 5' read P
DA729203.1 Clone NT2RM2002930 testis 5' read P
DA847763.1 Clone PLACE6016654 placenta 5' read P
DA887207.1 Clone PUAEN2007640 vascular 5' read P
DA864640.1 Clone PLACE7018464 placenta 5' read P
DA753781.1 Clone NT2RP7020072 testis 5' read P
DA749163.1 Clone NT2RP7014638 testis 5' read
BF511199.1 Clone IMAGE:3085096 uncharacterized tissue 3' read PA
BF797734.1 Clone IMAGE:4340946 lymph 5' read P
DB149968.1 Clone THYMU3026452 thymus 5' read P
DB164293.1 Clone THYMU3045902 thymus 5' read P
BF746678.1 mammary gland
DB140212.1 Clone THYMU3013129 thymus 5' read P
DB325043.1 Clone NT2RP7014638 testis 3' read P
DB097505.1 Clone TESTI4048803 testis 5' read P
DB366048.1 Clone NT2RP2004280 testis 3' read P
DB073069.1 Clone TESTI4016328 testis 5' read P
DW437459.1 liver
DW448342.1 liver
BF935372.1 brain
BF892537.1 blood P
BF899630.1 blood
BF899636.1 blood
BG055088.1 Clone IMAGE:3432222 prostate 3' read P
AL517648.3 Clone CS0DA003YP20 uncharacterized tissue 3' read P
AL517649.3 Clone CS0DA003YP20 uncharacterized tissue 5' read P
BG423091.1 Clone IMAGE:4588990 kidney 5' read P
BG473911.1 Clone IMAGE:4648001 eye 5' read P
BG474582.1 Clone IMAGE:4649224 eye 5' read
BG187496.1 connective tissue P
BG743920.1 Clone IMAGE:4849100 blood 5' read
BI048060.1 stomach
BI048109.1 stomach
BI048112.1 stomach
BI048172.1 stomach
BG950774.1 intestine P
EL736405.1 mixed 5' read P
BI464744.1 Clone IMAGE:5268117 testis 5' read
BM010937.1 Clone IMAGE:5421882 brain 5' read P
BM836850.1 Clone S9SNU601-78-B08 ascites 5' read P
BM920269.1 Clone IMAGE:5750186 mixed 5' read P
BM990366.1 Clone IMAGE:5857921 connective tissue 3' read A
BY999430.1 Clone cp1481 eye 3' read A
BQ773820.1 Clone UI-H-EZ1-bbz-h-24-0-UI bone 3' read A
BM150634.1 Clone TCBAP1134 lymph node PA
BM151897.1 Clone TCBAP1134 lymph node
BQ961287.1 Clone IMAGE:6484434 prostate 5' read
CA417296.1 Clone UI-H-FE0-bbt-b-14-0-UI bone 3' read PA
CA429901.1 Clone UI-H-FH1-bfn-p-24-0-UI bone 3' read A
T81605.1 Clone IMAGE:109721 mixed 5' read
T84537.1 Clone IMAGE:111927 mixed 5' read P
T91383.1 Clone IMAGE:111927 mixed 3' read P
AA579890.1 Clone IMAGE:1075286 intestine 3' read A
AA677243.1 Clone IMAGE:454332 mixed 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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