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UGID:158384     UniGene Hs.173679     Homo sapiens (human)   C1orf228
Chromosome 1 open reading frame 228 (C1orf228)

Human protein-coding gene C1orf228. Represented by 69 ESTs from 42 cDNA libraries. EST representation biased toward leukemia; juvenile. Corresponds to reference sequence NM_001145636.1. [UniGene 158384 - Hs.173679]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_513134.3 PREDICTED: uncharacterized protein C1orf228 homolog P. troglodytes 100.0 439
NP_001139108.1 C1orf228 gene product H. sapiens 100.0 439
NP_001139109.1 uncharacterized protein LOC381544 isoform 1 M. musculus 83.2 434
NP_001091266.1 uncharacterized protein LOC100037073 X. laevis 64.1 404
XP_001341083.1 PREDICTED: uncharacterized protein C1orf228 homolog D. rerio 62.5 403
Other hits (2 of 22) [Show all]SpeciesId(%)Len(aa)
XP_003891815.1 PREDICTED: uncharacterized protein C1orf228 homolog P. anubis 98.2 440
XP_001098567.2 PREDICTED: uncharacterized protein C1orf228-like M. mulatta 98.0 440

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: leukemia [show more like this]
juvenile [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; brain; mixed; lung; testis; uterus; mammary gland; placenta; pineal gland; intestine; lymph node; thymus; blood; embryonic tissue; eye; pancreas; bone marrow
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p34.1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

BC026115.1 Homo sapiens chromosome 1 open reading frame 228, mRNA (cDNA clone MGC:33556 IMAGE:4822241), complete cds PA
AY254217.1 Homo sapiens p40 mRNA, complete cds P
NM_001145636.1 Homo sapiens chromosome 1 open reading frame 228 (C1orf228), mRNA PA

EST sequences (69)

AA991457.1 Clone IMAGE:1609024 mammary gland 3' read
AI015341.1 Clone IMAGE:1618777 testis 3' read A
AI024065.1 Clone IMAGE:1642868 testis 3' read A
AI141011.1 Clone IMAGE:1671023 uncharacterized tissue 3' read
BX093906.1 Clone IMAGp998F205520_;_IMAGE:2231443 uterus
BX112141.1 Clone IMAGp998N164990_;_IMAGE:2028111 uncharacterized tissue A
BX098537.1 Clone IMAGp998P084758_;_IMAGE:1939063 embryonic tissue P
T25438.1 thymus A
AI341569.1 Clone IMAGE:1939063 embryonic tissue 3' read P
AI356486.1 Clone IMAGE:2028111 uncharacterized tissue 3' read
AI356499.1 Clone IMAGE:2027610 uncharacterized tissue 3' read P
AI382609.1 Clone IMAGE:2020527 uncharacterized tissue 3' read
AI436577.1 Clone IMAGE:2129398 uncharacterized tissue 3' read P
AI479074.1 Clone IMAGE:2158150 uncharacterized tissue 3' read
AI494416.1 Clone IMAGE:2021539 uncharacterized tissue 3' read
AI624778.1 Clone IMAGE:2231443 uterus 3' read
AI760165.1 Clone IMAGE:2369326 mixed 3' read P
AI762968.1 Clone IMAGE:2389329 uncharacterized tissue 3' read
CB306179.1 Clone UI-CF-EN1-aeh-n-22-0-UI lung 3' read A
AI638342.1 Clone IMAGE:2240322 uncharacterized tissue 3' read A
AI961010.1 Clone IMAGE:2475340 uncharacterized tissue 3' read A
CD365626.1 Clone UI-H-FT2-bjk-a-10-0-UI lung 3' read A
CD370841.1 Clone UI-H-FT1-bjz-l-03-0-UI lung 3' read A
AW015512.1 Clone IMAGE:2710558 uncharacterized tissue 3' read P
CD558529.1 Clone IMAGE:30396444 brain 5' read
AL119896.1 Clone DKFZp761O1024 brain 5' read P
AW135684.1 Clone IMAGE:2714490 mixed 3' read
AI906475.1 mammary gland
AW241888.1 Clone IMAGE:2700414 mixed 3' read P
AW511110.1 Clone IMAGE:2912267 mixed 3' read P
AW976629.1 uncharacterized tissue
AJ713037.1 Clone LKPD00992 bone marrow
BE244613.1 Clone TCBAP0009 lymph node
CV359946.1 placenta
BE674675.1 Clone IMAGE:3292794 uncharacterized tissue 3' read P
AA722107.1 Clone IMAGE:412374 pineal gland 3' read
BF594418.1 Clone IMAGE:3324589 intestine 3' read
BF890880.1 blood
DB561475.1 Clone H033038D09 brain 3' read A
DB494002.1 Clone H033053H16 brain 5' read
DB565037.1 Clone H033053H16 brain 3' read PA
N46889.1 Clone IMAGE:277711 brain 5' read
BI020556.1 blood
BI020585.1 blood
EL736436.1 mixed 5' read P
BG981564.1 intestine
BG719519.1 Clone IMAGE:4822241 testis 5' read P
BI520415.1 Clone IMAGE:5163814 brain 5' read
BI551766.1 Clone IMAGE:5277061 brain 5' read
BI824371.1 Clone IMAGE:5181742 mixed 5' read P
BI830265.1 Clone IMAGE:5164821 brain 5' read P
BM564126.1 Clone IMAGE:5742104 brain 5' read P
BM564237.1 Clone IMAGE:5742173 brain 5' read P
BM685217.1 Clone UI-E-EJ1-ajl-n-16-0-UI eye 3' read A
BM971816.1 Clone UI-CF-EC1-abn-l-11-0-UI lung 3' read PA
BM932224.1 Clone UI-E-EJ1-ajl-n-16-0-UI eye 5' read
GD135745.1 3' read A
BU609011.1 Clone UI-CF-FN0-aer-c-04-0-UI lung 3' read A
BU954418.1 Clone IMAGE:6725990 mixed 5' read
BU949601.1 Clone IMAGE:6126892 pancreas 3' read P
BU949884.1 Clone IMAGE:6126892 pancreas 5' read P
HY053543.1 Clone H04D189M12 testis P
HY241497.1 Clone H04D189M12 testis P
AA405142.1 Clone IMAGE:738438 mixed 5' read
AA521079.1 Clone IMAGE:826447 lymph node 3' read
AA585301.1 thymus A
AA707622.1 Clone 1292380 testis 3' read A
AA748905.1 Clone IMAGE:1284352 lymph node 3' read
AA883817.1 Clone IMAGE:1461644 mixed 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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