> DNA cross-link repair 1A (DCLRE1A)
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UGID:131031     UniGene Hs.1560     Homo sapiens (human)   DCLRE1A Order cDNA clone, Links
DNA cross-link repair 1A (DCLRE1A)

Human protein-coding gene DCLRE1A. Represented by 105 ESTs from 70 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 131031 - Hs.1560]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_055696.3 DCLRE1A gene product H. sapiens 100.0 1039
NP_061301.3 Dclre1a gene product M. musculus 73.2 1032
NP_001093331.1 uncharacterized protein LOC733261 X. laevis 68.7 399
NP_001018385.3 DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) D. rerio 67.3 367
NP_189302.1 DNA cross-link repair protein SNM1 A. thaliana 51.7 375
Other hits (2 of 33) [Show all]SpeciesId(%)Len(aa)
XP_508045.2 PREDICTED: DNA cross-link repair 1A protein P. troglodytes 99.1 1039
XP_003904323.1 PREDICTED: DNA cross-link repair 1A protein P. anubis 95.3 1038

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mammary gland; embryonic tissue; skin; mixed; muscle; lymph node; intestine; uterus; ovary; lung; stomach; blood; parathyroid; mouth; placenta; kidney; spleen; trachea; cervix; heart; larynx; eye; testis; uncharacterized tissue; liver; prostate; bone; amniotic fluid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10q25.1
UniSTS entry: Chr 10 D10S2349 [Map Viewer]
UniSTS entry: Chr 10 RH25314 [Map Viewer]
UniSTS entry: Chr 10 DCLRE1A
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

BC062582.1 Homo sapiens DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae), mRNA (cDNA clone MGC:70449 IMAGE:5202821), complete cds PA
D42045.1 Homo sapiens KIAA0086 mRNA, partial cds P
BC013124.2 Homo sapiens DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae), mRNA (cDNA clone MGC:5167 IMAGE:3048375), complete cds PA
AK307187.1 Homo sapiens cDNA, FLJ97135
NM_014881.4 Homo sapiens DNA cross-link repair 1A (DCLRE1A), transcript variant 2, mRNA PA
NM_001271816.1 Homo sapiens DNA cross-link repair 1A (DCLRE1A), transcript variant 1, mRNA A

EST sequences (105)

AA972882.1 Clone IMAGE:1577818 mixed 3' read A
AI016253.1 Clone IMAGE:1641272 testis 3' read A
CB146751.1 Clone L16HLK3-6-F12 liver 5' read P
CB130234.1 Clone L11SNU354-21-D09 liver 5' read P
AI243372.1 Clone IMAGE:1846243 mixed 3' read A
R37643.1 Clone IMAGE:26673 brain 3' read A
AI471483.1 Clone IMAGE:2044672 lymph node 3' read A
AI679517.1 Clone IMAGE:2255788 stomach 3' read A
AI679957.1 Clone IMAGE:2256172 stomach 3' read A
AI681848.1 Clone IMAGE:2271954 lung 3' read A
AI682192.1 Clone IMAGE:2301582 mixed 3' read A
AI683756.1 Clone IMAGE:2263427 uterus 3' read A
AI695881.1 Clone IMAGE:2238225 uncharacterized tissue 3' read A
AI743241.1 Clone IMAGE:2372346 mixed 3' read A
AI798412.1 Clone IMAGE:2220231 ovary 3' read A
AI884499.1 Clone IMAGE:2437741 uterus 3' read PA
AI914957.1 Clone IMAGE:2361996 mixed 3' read A
AI916657.1 Clone IMAGE:2390842 intestine 3' read A
AL043226.2 Clone DKFZp434I2423 testis 5' read P
BX375172.2 Clone CS0DC009YO12 uncharacterized tissue 5' read P
BX442880.2 Clone CS0DF038YP10 brain 3' read P
BX433249.1 Clone CS0DF038YP22 brain 3' read P
AI962459.1 Clone IMAGE:2474924 uncharacterized tissue 3' read P
BX475117.1 Clone DKFZp686K08174 muscle 5' read
BX475108.1 Clone DKFZp686J09174 muscle 5' read
AW104372.1 Clone IMAGE:2603660 mixed 3' read A
AW129003.1 Clone IMAGE:2615439 brain 3' read A
AW057633.1 Clone IMAGE:2553090 mixed 3' read A
AW370358.1 mammary gland
AW503848.1 Clone IMAGE:3078960 lymph node 5' read P
CN386670.1 embryonic tissue 5' read P
CN395756.1 embryonic tissue 5' read
CR737822.1 Clone IMAGp998H06602_;_IMAGE:273461 skin 5' read P
BP201310.1 Clone AMR05161 brain 5' read
BP314119.1 Clone OFR05364 mammary gland 5' read
BE301707.1 Clone IMAGE:3048375 cervix 3' read A
BP277762.1 Clone KGR00286 brain 5' read P
BP310573.1 Clone NRR02909 brain 5' read
BP380409.1 Clone WMD09680 uterus 5' read P
BE671341.1 Clone IMAGE:3285833 lung 3' read A
BE696522.1 intestine
DN993394.1 Clone TC114942 brain 5' read
DR005458.1 Clone TC100363 prostate 5' read
BE893900.1 Clone IMAGE:3921400 skin 5' read P
BF035397.1 Clone IMAGE:3858676 ovary 5' read P
BF037704.1 Clone IMAGE:3865251 ovary 5' read P
DR760462.1 Clone IMAGE:7969698 embryonic tissue 5' read P
AU124071.1 Clone NT2RM2001617 testis 5' read P
BF446475.1 Clone IMAGE:3706564 lung 3' read A
AA860577.1 Clone IMAGE:1403324 parathyroid 3' read A
DA312528.1 Clone BRHIP3001617 brain 5' read
DA242432.1 Clone BRAWH3040420 brain 5' read
DA321700.1 Clone BRHIP3015031 brain 5' read
DA322168.1 Clone BRHIP3015692 brain 5' read
DA331911.1 Clone BRHIP3029873 brain 5' read
DA419991.1 Clone CD34C3000315 blood 5' read
BF854757.1 prostate P
DA437682.1 Clone CTONG2005159 mouth 5' read
DA634644.1 Clone KIDNE2016582 kidney 5' read
DA460451.1 Clone CTONG3007226 mouth 5' read
DA456679.1 Clone CTONG3001985 mouth 5' read
DA852845.1 Clone PLACE7002882 placenta 5' read
DA927159.1 Clone SMINT2014320 intestine 5' read
DA790060.1 Clone OCBBF2028592 brain 5' read P
DA945804.1 Clone SPLEN2021388 spleen 5' read
DB225487.1 Clone TRACH3017398 trachea 5' read P
DB219784.1 Clone TRACH3009919 trachea 5' read
BF734958.1 amniotic fluid P
DB228087.1 Clone TRACH3020793 trachea 5' read
DB282251.1 Clone UTERU3009442 uterus 5' read
BF840185.1 larynx P
H98725.1 Clone IMAGE:261629 skin 3' read A
N24158.1 Clone IMAGE:269590 skin 3' read A
N24294.1 Clone IMAGE:261629 skin 5' read P
DB528795.1 Clone H023003B03 brain 3' read A
N30156.1 Clone IMAGE:268176 skin 3' read A
N35771.1 Clone IMAGE:268176 skin 5' read
N36192.1 Clone IMAGE:269590 skin 5' read P
N36888.1 Clone IMAGE:273460 skin 3' read A
N46162.1 Clone IMAGE:273460 skin 5' read P
BG617256.1 Clone IMAGE:4734568 liver 5' read P
BI091198.1 Clone IMAGE:4997359 placenta 5' read P
BI031412.1 blood P
N84962.1 Clone J1722 heart 5' read P
BI259185.1 Clone IMAGE:5109679 cervix 5' read
AL599941.1 Clone DKFZp313I2431 uncharacterized tissue 5' read P
BI770136.1 Clone IMAGE:5202821 mixed 5' read
W03887.1 Clone IMAGE:296989 mixed 5' read P
BM545344.1 Clone IMAGE:5727087 brain 5' read P
BM669217.1 Clone UI-E-DX1-agy-l-24-0-UI eye 3' read A
BM669585.1 Clone UI-E-DX1-agw-i-21-0-UI eye 3' read A
BM693632.1 Clone UI-E-DX1-agy-l-24-0-UI eye 5' read P
BM698798.1 Clone UI-E-DX1-agw-i-21-0-UI eye 5' read P
BM699560.1 Clone UI-E-DX1-agy-o-02-0-UI eye 5' read P
BM703845.1 Clone UI-E-CL1-aff-p-10-0-UI eye 5' read P
AL700451.1 Clone DKFZp686O02118 muscle 5' read
BQ022883.1 Clone UI-1-BB1p-axw-e-03-0-UI placenta 3' read A
AA011189.1 Clone IMAGE:359764 heart 3' read A
BU623158.1 Clone UI-H-FL1-bgd-p-15-0-UI bone 3' read A
CA425904.1 Clone UI-H-FE1-beg-b-02-0-UI bone 3' read PA
CA489699.1 Clone IMAGE:6722179 mixed 5' read P
AA630074.1 Clone IMAGE:951790 lung 3' read A
AA713613.1 Clone IMAGE:1235193 lymph node 3' read A
R13785.1 Clone IMAGE:26673 brain 5' read P
AA953537.1 Clone IMAGE:1562985 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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