> Reticulon 4 interacting protein 1 (RTN4IP1)
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UGID:154583     UniGene Hs.155839     Homo sapiens (human)   RTN4IP1 Order cDNA clone, Links
Reticulon 4 interacting protein 1 (RTN4IP1)

Human protein-coding gene RTN4IP1. Represented by 99 ESTs from 64 cDNA libraries. Corresponds to reference sequence NM_032730.4. [UniGene 154583 - Hs.155839]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_116119.2 RTN4IP1 gene product H. sapiens 100.0 395
XP_001145925.2 PREDICTED: reticulon-4-interacting protein 1, mitochondrial isoform 2 P. troglodytes 99.8 395
NP_570962.2 Rtn4ip1 gene product M. musculus 93.2 395
NP_956646.1 rtn4ip1 gene product D. rerio 74.3 354
NP_001091139.1 reticulon 4 interacting protein 1 X. laevis 72.1 366
Other hits (2 of 30) [Show all]SpeciesId(%)Len(aa)
XP_002714919.1 PREDICTED: reticulon 4 interacting protein 1 O. cuniculus 96.7 395
XP_003898019.1 PREDICTED: LOW QUALITY PROTEIN: reticulon-4-interacting protein 1, mitochondrial P. anubis 96.5 401

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: pituitary gland; tonsil; stomach; uncharacterized tissue; brain; skin; pancreas; testis; eye; blood; thymus; prostate; lung; embryonic tissue; thyroid; connective tissue; intestine; liver; placenta; kidney; lymph node; cervix; ascites; lymph; mouth; bone; mixed; bone marrow
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6q21
UniSTS entry: Chr 1 L30021
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

BC006399.2 Homo sapiens reticulon 4 interacting protein 1, mRNA (cDNA clone MGC:12934 IMAGE:4309263), complete cds PA
NM_032730.4 Homo sapiens reticulon 4 interacting protein 1 (RTN4IP1), nuclear gene encoding mitochondrial protein, mRNA P
AF439711.1 Homo sapiens NOGO-interacting mitochondrial protein short isoform mRNA, complete cds, alternatively spliced; nuclear gene for mitochondrial product P
AY063761.1 Homo sapiens NOGO-interacting mitochondrial protein mRNA, complete cds P
AK313962.1 Homo sapiens cDNA, FLJ94608, Homo sapiens reticulon 4 interacting protein 1 (RTN4IP1), mRNA P
AK095207.1 Homo sapiens cDNA FLJ37888 fis, clone BRTHA2000474 P

EST sequences (99)

BX108883.1 Clone IMAGp998O195262_;_IMAGE:2132586 lymph node A
CB132294.1 Clone L11SNU354s1-1-H05 liver 5' read P
CB143318.1 Clone L11SNU354s1-11-E06 liver 5' read
AI309954.1 Clone IMAGE:1914004 kidney 3' read PA
AI434133.1 Clone IMAGE:2132586 lymph node 3' read A
AI474619.1 Clone IMAGE:2160076 kidney 3' read PA
AI760971.1 Clone IMAGE:2398707 kidney 3' read A
AL037647.2 Clone DKFZp564M2172 brain 5' read P
CB986318.1 Clone IMAGE:30329777 mixed 5' read P
CD105442.1 Clone IMAGE:30364515 pituitary gland 5' read P
BX431434.2 Clone CS0DE009YN23 placenta 5' read P
BX434237.2 Clone CS0DE009YN23 placenta 3' read P
BX439330.2 Clone CS0DE009YN23 placenta 5' read P
BX427378.2 Clone CS0DM010YA03 liver 5' read P
AW247696.1 Clone IMAGE:2820067 lung 5' read
AW248031.1 Clone IMAGE:2820055 lung 3' read A
AW403615.1 Clone IMAGE:3056292 lymph node 5' read
CN315391.1 embryonic tissue 5' read
CN367022.1 embryonic tissue 5' read
CN367023.1 embryonic tissue 5' read
BE172388.1 thyroid
CV026903.1 mixed 5' read P
CR736499.1 Clone IMAGp998A025038_;_IMAGE:2046217 uncharacterized tissue 5' read
BE265140.1 Clone IMAGE:3537333 lung 5' read
BP273137.1 Clone KAT07895 stomach 5' read P
BP289002.1 Clone LNF00881 lung 5' read P
CX755358.1 Clone IMAGE:7779327 embryonic tissue 5' read P
CX756080.1 Clone IMAGE:7782460 embryonic tissue 3' read P
CX760104.1 Clone IMAGE:7770208 embryonic tissue 3' read P
BP393420.1 Clone htp-33-45 pancreas 3' read PA
DN991244.1 Clone TC104025 brain 5' read
BE894352.1 Clone IMAGE:3918104 skin 5' read
BF128918.1 Clone IMAGE:4054490 tonsil 5' read
BF214522.1 Clone IMAGE:4076706 bone marrow 5' read
BF238065.1 Clone IMAGE:4054795 tonsil 5' read P
BF664073.1 Clone IMAGE:4309263 tonsil 5' read
DA279821.1 Clone BRCOC2007996 brain 5' read
DA266760.1 Clone BRCAN2020282 brain 5' read
DA539414.1 Clone FEKID2002401 kidney 5' read
DA395284.1 Clone BRTHA2034588 brain 5' read
DA370820.1 Clone BRTHA2000474 brain 5' read P
DA489247.1 Clone FCBBF3000151 brain 5' read
DA732604.1 Clone NT2RP2001043 testis 5' read
DB038851.1 Clone TESTI2025223 testis 5' read
BF433668.1 Clone IMAGE:3703023 lung 3' read PA
BF433676.1 Clone IMAGE:3703071 lung 3' read PA
DA966128.1 Clone STOMA2004545 stomach 5' read
DB020654.1 Clone TESTI2000923 testis 5' read
DB049694.1 Clone TESTI2039073 testis 5' read
BF591333.1 Clone IMAGE:3318944 intestine 3' read PA
DB310876.1 Clone BRTHA2000474 brain 3' read
DB344156.1 Clone THYMU2033276 thymus 3' read PA
DB384794.1 Clone Y79AA1002228 eye 3' read PA
DB051074.1 Clone TESTI2040853 testis 5' read
DB364170.1 Clone NT2RP2001043 testis 3' read PA
DB294650.1 Clone Y79AA1002228 eye 5' read P
BF811899.1 intestine
BG035403.1 Clone IMAGE:4412886 liver 5' read P
BF905014.1 blood
DB442478.1 Clone H013004J12 testis 5' read
DB507322.1 Clone H013004J12 testis 3' read PA
EC531952.1 prostate
EC546957.1 prostate
EC551718.1 prostate
EC564726.1 prostate
EC580321.1 prostate
EC580655.1 prostate
BG436890.1 Clone IMAGE:4621100 lung 5' read P
BG189849.1 connective tissue
BG190377.1 connective tissue
BG191855.1 connective tissue
BG191856.1 connective tissue
BG197983.1 connective tissue
BG208380.1 connective tissue
BG217370.1 connective tissue
BG676745.1 Clone IMAGE:4748066 skin 5' read P
BG684917.1 Clone IMAGE:4764349 tonsil 5' read P
BG755358.1 Clone IMAGE:4854219 tonsil 5' read P
BG900468.1 connective tissue
BG720291.1 Clone IMAGE:4824757 testis 5' read
BG721218.1 Clone IMAGE:4825513 testis 5' read
BI260565.1 Clone IMAGE:5112149 cervix 5' read P
BI829392.1 Clone IMAGE:5172313 brain 5' read
BM793616.1 Clone S22SNU16n1-30-H08 ascites 5' read P
BM829623.1 Clone S21SNU520s1-14-E10 stomach 5' read
BM857353.1 Clone S21SNU520-70-B04 stomach 5' read
BM922394.1 Clone IMAGE:5755392 blood 5' read P
BQ059479.1 Clone IMAGE:5815539 lymph 5' read P
BQ069356.1 Clone IMAGE:5811752 brain 5' read
BQ348179.1 mouth P
BQ574215.1 Clone UI-H-EZ1-baz-c-10-0-UI bone 3' read PA
BQ927802.1 Clone IMAGE:6383072 prostate 5' read
BQ936729.1 Clone IMAGE:6481725 prostate 5' read P
BQ957823.1 Clone IMAGE:6383097 prostate 5' read
C02357.1 uncharacterized tissue
BU621544.1 Clone UI-H-FL1-bga-k-04-0-UI bone 3' read PA
BU622175.1 Clone UI-H-FH1-bfu-i-08-0-UI bone 3' read PA
AA312336.1 blood 5' read P
AA357861.1 lung 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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