> Hippocampus abundant transcript 1 (HIAT1)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:146676     UniGene Hs.124156     Homo sapiens (human)   HIAT1 Links
Hippocampus abundant transcript 1 (HIAT1)

Human protein-coding gene HIAT1. Represented by 200 ESTs from 134 cDNA libraries. Corresponds to reference sequence NM_033055.2. [UniGene 146676 - Hs.124156]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_032272.2 Hiat1 gene product M. musculus 100.0 489
XP_003892304.1 PREDICTED: hippocampus abundant transcript 1 protein P. anubis 100.0 489
XP_001160022.1 PREDICTED: hippocampus abundant transcript 1 protein isoform 3 P. troglodytes 100.0 489
NP_149044.2 HIAT1 gene product H. sapiens 100.0 489
NP_001095508.1 HIAT1 gene product B. taurus 100.0 489
XP_004002278.1 PREDICTED: hippocampus abundant transcript 1 protein O. aries 100.0 489
XP_002715884.1 PREDICTED: hippocampus abundant transcript 1 O. cuniculus 100.0 489
XP_003481554.1 PREDICTED: hippocampus abundant transcript 1 protein-like S. scrofa 100.0 461
NP_001099937.1 hippocampus abundant gene transcript 1 R. norvegicus 99.8 489
XP_001106724.1 PREDICTED: hippocampus abundant transcript 1 protein-like M. mulatta 99.8 489
XP_001488919.1 PREDICTED: hippocampus abundant transcript 1 protein-like isoform 1 E. caballus 99.6 489
NP_001085612.1 MGC82622 protein X. laevis 97.3 483
NP_955878.1 hiat1a gene product D. rerio 90.3 492
NP_647771.1 CG11537, isoform C D. melanogaster 72.5 421
NP_493670.2 Protein T25D3.4 C. elegans 65.5 443
Other hits (2 of 28) [Show all]SpeciesId(%)Len(aa)
XP_854950.2 PREDICTED: hippocampus abundant transcript 1 protein C. lupus familiaris 98.8 504
XP_003220041.1 PREDICTED: hippocampus abundant transcript 1 protein-like A. carolinensis 98.8 490

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; uncharacterized tissue; testis; blood; connective tissue; esophagus; placenta; muscle; uterus; kidney; lung; embryonic tissue; vascular; liver; stomach; intestine; cervix; mammary gland; larynx; prostate; skin; pancreas; adrenal gland; ovary; eye; lymph node; ear; pharynx; pituitary gland; bone marrow; bladder; mouth; thymus; trachea; parathyroid; ascites; heart; adipose tissue; ganglia; bone; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p21.2
UniSTS entry: Chr 1 G54141
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

AK127671.1 Homo sapiens cDNA FLJ45769 fis, clone NETRP2002082
BC064409.1 Homo sapiens hippocampus abundant transcript 1, mRNA (cDNA clone IMAGE:5737455), partial cds PA
AL137576.1 Homo sapiens mRNA; cDNA DKFZp564L0864 (from clone DKFZp564L0864) PA
BC107768.1 Homo sapiens hippocampus abundant transcript 1, mRNA (cDNA clone IMAGE:4720459), partial cds PA
AK057172.1 Homo sapiens cDNA FLJ32610 fis, clone STOMA2000055, highly similar to Mouse mRNA for tetracycline transporter-like protein P
AF427492.1 Homo sapiens putative tetracycline transporter-like protein mRNA, complete cds P
AK096669.1 Homo sapiens cDNA FLJ39350 fis, clone PEBLM2000222, highly similar to Mouse mRNA for tetracycline transporter-like protein P
AK075208.1 Homo sapiens cDNA FLJ90727 fis, clone PLACE1009600, highly similar to Hippocampus abundant gene transcript 1 P
BC033696.1 Homo sapiens hippocampus abundant transcript 1, mRNA (cDNA clone IMAGE:3446672), with apparent retained intron PA
NM_033055.2 Homo sapiens hippocampus abundant transcript 1 (HIAT1), mRNA PA

EST sequences (200)

AA973432.1 Clone IMAGE:1569054 lung 3' read
R15078.1 Clone IMAGE:25364 brain 3' read A
AA999742.1 Clone IMAGE:1609113 mammary gland 3' read A
AA905036.1 Clone IMAGE:1507315 mixed 3' read A
AI150308.1 Clone IMAGE:1752484 testis 3' read
BX114481.1 Clone IMAGp998A12137_;_IMAGE:25364 brain A
AI221283.1 Clone IMAGE:1842587 mixed 3' read
CB143563.1 Clone L16HLK3-27-A02 liver 5' read
CB146362.1 Clone L16HLK3-26-H08 liver 5' read P
CB154125.1 Clone L17N670205-3-G03 liver 5' read P
CB119455.1 Clone L8SCK0-25-B06 liver 5' read
CB151565.1 Clone C1SNU17-36-B09 cervix 5' read A
AI243268.1 Clone IMAGE:1846693 mixed 3' read
AI474597.1 Clone IMAGE:2156360 intestine 3' read A
AI480408.1 Clone IMAGE:2161714 kidney 3' read A
AI493818.1 Clone IMAGE:2030420 kidney 3' read A
AI564159.1 Clone IMAGE:2175542 uterus 3' read A
AI628302.1 Clone IMAGE:2258026 stomach 3' read A
AI692445.1 Clone IMAGE:2336966 lung 3' read A
AI692446.1 Clone IMAGE:2336968 lung 3' read A
CB243187.1 Clone UI-CF-FN0-agc-g-22-0-UI lung 3' read A
R59983.1 Clone IMAGE:42593 brain 3' read A
AI802494.1 Clone IMAGE:2187202 stomach 3' read
CB268352.1 adipose tissue 5' read
AI886111.1 Clone IMAGE:2445592 stomach 3' read A
AI925263.1 Clone IMAGE:2444254 uterus 3' read
AI933516.1 Clone IMAGE:2441697 uterus 3' read
BX390107.1 Clone CS0DB004YG23 uncharacterized tissue 5' read
AW005484.1 Clone IMAGE:2505629 intestine 3' read A
CD511309.1 Clone IMAGE:30405749 vascular 5' read
BX476344.1 Clone DKFZp686K01185 muscle 5' read
AW023810.1 Clone IMAGE:2487967 ear 5' read A
CD642679.1 Clone IMAGE:30427387 embryonic tissue 5' read P
CD678331.1 Clone hp06a01 eye 5' read
CD707763.1 pharynx P
AW075821.1 Clone IMAGE:2573074 blood 3' read A
AW138001.1 Clone IMAGE:2714611 mixed 3' read A
AI907566.1 mammary gland
AI907578.1 mammary gland P
AW377367.1 intestine
R67165.1 Clone IMAGE:42593 brain 5' read P
AW473186.1 Clone IMAGE:2750492 uterus 3' read A
AW473189.1 Clone IMAGE:2750493 uterus 3' read A
AW514505.1 Clone IMAGE:2806414 uterus 3' read A
AW518426.1 Clone IMAGE:2851259 lymph node 3' read A
AW838469.1 uncharacterized tissue
CN358667.1 embryonic tissue 5' read P
CN358668.1 embryonic tissue 5' read P
BE047064.1 Clone IMAGE:3123327 pancreas 3' read A
BE094125.1 mammary gland
BP871672.1 Clone HKR01276 kidney 5' read P
BP872451.1 Clone HKR07081 kidney 5' read P
CR748890.1 Clone IMAGp998N184255_;_IMAGE:1676369 uncharacterized tissue 5' read
BP228494.1 Clone DMC09522 uncharacterized tissue 5' read P
BP330543.1 Clone RCT06789 intestine 5' read P
BP345898.1 Clone SYN08019 connective tissue 5' read P
BP350685.1 Clone T3R00835 esophagus 5' read P
BP369951.1 Clone TST03932 testis 5' read P
BP276795.1 Clone KDN07267 kidney 5' read
BP291114.1 Clone LNF07633 lung 5' read P
BP336215.1 Clone SMR05076 vascular 5' read P
BE348585.1 Clone IMAGE:3152270 lung 3' read A
BE464608.1 Clone IMAGE:3144013 kidney 3' read A
BE539469.1 Clone IMAGE:3446672 placenta 5' read P
BE568827.1 Clone IMAGE:3684354 bladder 5' read
BE720141.1 larynx P
DN601871.1 Clone IMAGE:7482569 embryonic tissue 5' read
BE884890.1 Clone IMAGE:3908549 uterus 5' read P
DN992831.1 Clone TC112343 brain 5' read P
DR005499.1 Clone TC100485 prostate 5' read P
BE890300.1 Clone IMAGE:3916860 skin 5' read A
BE927249.1 intestine P
AV703180.1 Clone ADBAOF10 adrenal gland 5' read A
BF029950.1 Clone IMAGE:3827148 kidney 5' read P
BF036183.1 Clone IMAGE:3861876 ovary 5' read P
BF082419.1 mammary gland P
AV748826.1 Clone NPCAHF06 pituitary gland 5' read
BF185230.1 Clone IMAGE:4064477 bone marrow 5' read
BF185533.1 Clone IMAGE:4045111 bone marrow 5' read
BF221999.1 Clone IMAGE:3648504 prostate 3' read A
AA862602.1 Clone IMAGE:1457084 kidney 3' read A
BF666009.1 Clone IMAGE:4276410 brain 5' read P
DA279346.1 Clone BRCOC2007355 brain 5' read P
DA175679.1 Clone BRAMY2039085 brain 5' read P
DA257176.1 Clone BRCAN2008420 brain 5' read P
BF701839.1 Clone IMAGE:4285824 brain 5' read P
DA075502.1 Clone BRACE2027331 brain 5' read P
DA615492.1 Clone IMR322014720 brain 5' read
DA662278.1 Clone MESTC2000342 uncharacterized tissue 5' read P
H68571.1 Clone IMAGE:239021 pharynx 5' read
DA451818.1 Clone CTONG2024325 mouth 5' read P
DA422024.1 Clone CERVX2001893 cervix 5' read P
DA384294.1 Clone BRTHA2018875 brain 5' read P
DA962415.1 Clone STOMA2000055 stomach 5' read P
DA813286.1 Clone PEBLM2000222 blood 5' read P
DA710504.1 Clone NT2RI2016013 5' read P
DA816668.1 Clone PEBLM2004450 blood 5' read P
DB048992.1 Clone TESTI2038174 testis 5' read
DA830273.1 Clone PLACE1004746 placenta 5' read P
BF541552.1 Clone IMAGE:4066927 kidney 5' read P
DA832683.1 Clone PLACE1009600 placenta 5' read P
DA716825.1 Clone NT2RI2024504 5' read P
DA829574.1 Clone PLACE1003384 placenta 5' read P
DA986275.1 Clone SYNOV2019501 connective tissue 5' read P
DB375371.1 Clone PLACE1004746 placenta 3' read A
DB266105.1 Clone UTERU2025684 uterus 5' read
DB378985.1 Clone PLACE1009600 placenta 3' read A
DB241909.1 Clone TSTOM2000221 stomach 5' read P
DB130758.1 Clone THYMU3000180 thymus 5' read
DB171529.1 Clone TKIDN2006501 kidney 5' read P
DB198864.1 Clone TRACH2007057 trachea 5' read P
DB322255.1 Clone NETRP2002082 blood 3' read
DB144121.1 Clone THYMU3018507 thymus 5' read P
DB334437.1 Clone STOMA2000055 stomach 3' read
BF764213.1 intestine
DB374453.1 Clone PLACE1003384 placenta 3' read A
BF970576.1 Clone IMAGE:4361922 adrenal gland 5' read
BF977974.1 Clone IMAGE:4307461 skin 5' read
BG260967.1 Clone IMAGE:4480603 bladder 5' read P
AL519740.3 Clone CS0DB004YG23 uncharacterized tissue 5' read P
EC458591.1 prostate
BG435115.1 Clone IMAGE:4604118 placenta 5' read
BG547163.1 Clone IMAGE:4702505 lung 5' read
BG536163.1 Clone IMAGE:4688922 lung 5' read P
BG571836.1 Clone IMAGE:4720459 placenta 5' read P
N50425.1 Clone IMAGE:280632 brain 3' read A
N50481.1 Clone IMAGE:280632 brain 5' read
N58860.1 Clone IMAGE:288857 brain 3' read A
N66880.1 Clone IMAGE:287139 ear 3' read A
BI051624.1 placenta P
N72725.1 Clone IMAGE:288857 brain 5' read A
BJ990074.1 Clone hkmt-0638 liver 5' read P
BJ990075.1 Clone hkmt-0638 liver 3' read
BI260147.1 Clone IMAGE:5108251 cervix 5' read
BI496333.1 Clone IMAGE:2540257 ear 5' read A
N91244.1 Clone IMAGE:305839 parathyroid 3' read A
BI871712.1 Clone IMAGE:5405526 liver 5' read
BI915133.1 Clone IMAGE:5241635 brain 5' read
W19898.1 Clone IMAGE:305839 parathyroid 5' read
BM273193.1 Clone IMAGE:5677799 pancreas 3' read A
BM354163.1 Clone IMAGE:5677799 pancreas 5' read
BM469947.1 Clone IMAGE:5538811 skin 5' read
BM547392.1 Clone IMAGE:5724390 ovary 5' read PA
BM564578.1 Clone IMAGE:5737455 intestine 5' read P
BM669700.1 Clone UI-E-DX1-agw-f-11-0-UI eye 3' read A
BM698917.1 Clone UI-E-DX1-agw-f-11-0-UI eye 5' read
BM714733.1 Clone UI-E-EJ0-ahs-i-02-0-UI eye 5' read
W52073.1 Clone IMAGE:325483 skin 5' read P
BM752876.1 Clone S9SNU601-8-E10 ascites 5' read P
BM923304.1 Clone IMAGE:5758896 mixed 5' read P
BM967150.1 Clone IMAGE:6136223 pancreas 5' read
BM967278.1 Clone IMAGE:6136522 pancreas 5' read
BM982843.1 Clone UI-CF-EN1-acr-n-03-0-UI lung 3' read A
BM999166.1 Clone IMAGE:5882088 lung 3' read A
BQ023384.1 Clone UI-1-BB1p-avb-f-12-0-UI placenta 3' read A
BQ024802.1 Clone UI-1-BB1p-ats-e-12-0-UI placenta 3' read A
BQ025584.1 Clone UI-1-BB1p-axx-d-09-0-UI placenta 3' read A
BQ225666.1 Clone IMAGE:6070555 lung 5' read P
AA023009.1 Clone IMAGE:364330 heart 5' read
AA022475.1 Clone IMAGE:364330 heart 3' read
BU188716.1 Clone IMAGE:6107747 bone marrow 5' read
BU146191.1 Clone IMAGE:6178301 ganglia 5' read P
BU533593.1 Clone IMAGE:6560038 mixed 5' read
AA098971.1 Clone IMAGE:550356 cervix 3' read
AA098832.1 Clone IMAGE:550356 cervix 5' read A
AA099874.1 Clone IMAGE:510796 intestine 3' read A
AA099754.1 Clone IMAGE:510796 intestine 5' read P
FN161029.1 Clone 266726_0943_2080
AA131860.1 Clone IMAGE:504075 uterus 3' read A
AA131754.1 Clone IMAGE:504075 uterus 5' read
BU569996.1 Clone IMAGE:6618100 testis 5' read P
BY996589.1 Clone MCT0945 5' read P
AA181586.1 Clone IMAGE:613002 cervix 3' read
AA182936.1 Clone IMAGE:613002 cervix 5' read
AA223840.1 Clone IMAGE:648593 testis 5' read P
BU753242.1 Clone UI-1-BB1-ain-e-10-0-UI placenta 3' read A
BU753784.1 Clone UI-1-BB1p-akk-c-08-0-UI placenta 3' read A
BU754187.1 Clone UI-1-BB1p-atp-d-09-0-UI placenta 3' read A
AA251983.1 Clone IMAGE:668050 mixed 3' read A
AA252089.1 Clone IMAGE:668050 mixed 5' read
CA313133.1 Clone UI-CF-FN0-aex-n-01-0-UI lung 3' read A
CA393529.1 Clone cs39c02 eye 5' read P
AA282162.1 Clone IMAGE:712873 lymph node 5' read
AA304569.1 bone 5' read P
AA310060.1 blood 5' read
AA330102.1 embryonic tissue 5' read
AA401846.1 Clone IMAGE:758634 embryonic tissue 5' read
AA428288.1 Clone IMAGE:774173 embryonic tissue 3' read A
AA445920.1 Clone IMAGE:774173 embryonic tissue 5' read
AA453152.1 Clone IMAGE:788799 embryonic tissue 5' read P
AA478646.1 Clone IMAGE:754071 mixed 5' read P
AA479187.1 Clone IMAGE:754071 mixed 3' read
AA609828.1 Clone IMAGE:951480 lung 3' read A
AA641767.1 Clone IMAGE:1184079 lymph node 5' read P
AA651812.1 Clone IMAGE:1184079 lymph node 3' read A
M86080.1 Clone HFBDJ09 brain
AA700937.1 Clone IMAGE:383881 pineal gland 3' read A
AA721370.1 Clone IMAGE:1300766 lymph node 3' read A
AA805266.1 Clone IMAGE:1338289 lymph node 3' read A
R12145.1 Clone IMAGE:25364 brain 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help