Forkhead box R1 (FOXR1)

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UGID:144923 UniGene Hs.116679 Homo sapiens (human) FOXR1

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Forkhead box R1 (FOXR1)

Human protein-coding gene FOXR1. Represented by 14 ESTs from 5 cDNA libraries. Corresponds to reference sequence NM_181721.2. [UniGene 144923 - Hs.116679]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_859072.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	FOXR1 gene product	H. sapiens	100.0	291
XP_522201.4 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: forkhead box protein R1	P. troglodytes	99.7	291
NP_001030066.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Foxr2 gene product	M. musculus	55.0	301
Other hits (2 of 11) [Show all]		Species	Id(%)	Len(aa)
XP_002799911.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: forkhead box protein R1-like	M. mulatta	98.3	291
XP_003910846.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: forkhead box protein R1	P. anubis	98.3	291

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	testis; uncharacterized tissue; brain; mixed

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	11
	Map position:	11q23.3

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

AB094092.1	Homo sapiens DLNB13 mRNA, complete cds	P
NM_181721.2	Homo sapiens forkhead box R1 (FOXR1), mRNA	PA
BC125040.1	Homo sapiens forkhead box R1, mRNA (cDNA clone MGC:149486 IMAGE:40115641), complete cds	P
BC028191.1	Homo sapiens forkhead box R1, mRNA (cDNA clone MGC:40176 IMAGE:5167039), complete cds	PA
BC038969.1	Homo sapiens forkhead box R1, mRNA (cDNA clone MGC:47864 IMAGE:5164198), complete cds	PA

EST sequences (14)

BX089058.1	Clone IMAGp998P121829_;_IMAGE:744827	testis		P
AI638832.1	Clone IMAGE:2242513	uncharacterized tissue	3' read	PA
AI968909.1	Clone IMAGE:2476355	uncharacterized tissue	3' read	P
AI992357.1	Clone IMAGE:2497592	uncharacterized tissue	3' read	P
AW589848.1	Clone IMAGE:2946514	uncharacterized tissue	3' read	PA
EL734924.1		mixed	5' read	P
BI825543.1	Clone IMAGE:5164198	brain	5' read	P
BI830675.1	Clone IMAGE:5167039	brain	5' read	P
HY032558.1	Clone H04D112J02	testis		P
HY047030.1	Clone H04D165D12	testis		P
HY217143.1	Clone H04D112J02	testis		P
HY232548.1	Clone H04D161L09	testis		P
HY233615.1	Clone H04D165D12	testis		P
AA669512.1	Clone 744827	testis	3' read	PA

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria