> Raftlin, lipid raft linker 1 (RFTN1)
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UGID:142526     UniGene Hs.98910     Homo sapiens (human)   RFTN1 Order cDNA clone, Links
Raftlin, lipid raft linker 1 (RFTN1)

Human protein-coding gene RFTN1. Represented by 517 ESTs from 166 cDNA libraries. Corresponds to reference sequence NM_015150.1. [UniGene 142526 - Hs.98910]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_055965.1 RFTN1 gene product H. sapiens 100.0 577
XP_516313.3 PREDICTED: raftlin isoform 2 P. troglodytes 99.8 577
NP_852062.1 raftlin M. musculus 83.2 553
Other hits (2 of 18) [Show all]SpeciesId(%)Len(aa)
XP_001083771.2 PREDICTED: raftlin-like M. mulatta 97.2 542
XP_003895199.1 PREDICTED: raftlin P. anubis 96.7 548

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: tonsil; lymph; brain; mixed; lymph node; skin; liver; pancreas; adipose tissue; spleen; testis; heart; uncharacterized tissue; lung; adrenal gland; amniotic fluid; blood; connective tissue; placenta; prostate; vascular; eye; embryonic tissue; intestine; uterus; salivary gland; bone; ovary; kidney; muscle; mouth; thymus; mammary gland; stomach; trachea; ear; ganglia; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3p24.3
UniSTS entry: Chr 3 D3S3885 [Map Viewer]
UniSTS entry: Chr 3 RH12058 [Map Viewer]
UniSTS entry: Chr 3 RH25312 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (17)

BC051336.1 Homo sapiens raftlin, lipid raft linker 1, mRNA (cDNA clone IMAGE:6303552) PA
NM_015150.1 Homo sapiens raftlin, lipid raft linker 1 (RFTN1), mRNA PA
BC069209.1 Homo sapiens raftlin, lipid raft linker 1, mRNA (cDNA clone IMAGE:5434191) PA
AY237654.1 Homo sapiens cell migration-inducing gene 2 mRNA, complete cds PA
D42043.1 Homo sapiens KIAA0084 mRNA, partial cds P
BC098270.1 Homo sapiens raftlin, lipid raft linker 1, mRNA (cDNA clone MGC:118868 IMAGE:40001191), complete cds P
BC100667.1 Homo sapiens raftlin, lipid raft linker 1, mRNA (cDNA clone MGC:118866 IMAGE:40001188), complete cds P
BC100669.1 Homo sapiens raftlin, lipid raft linker 1, mRNA (cDNA clone MGC:118867 IMAGE:40001190), complete cds P
BC121795.1 Homo sapiens raftlin, lipid raft linker 1, mRNA (cDNA clone MGC:141678 IMAGE:40011545), complete cds P
BC006400.2 Homo sapiens raftlin, lipid raft linker 1, mRNA (cDNA clone IMAGE:4309033), partial cds PA
BC128151.1 Homo sapiens cDNA clone IMAGE:40112616 P
BC014032.2 Homo sapiens raftlin, lipid raft linker 1, mRNA (cDNA clone IMAGE:4334727), partial cds PA
AK310258.1 Homo sapiens cDNA, FLJ17300 P
AK074446.1 Homo sapiens cDNA FLJ23866 fis, clone LNG09267 PA
BC032349.1 Homo sapiens raftlin, lipid raft linker 1, mRNA (cDNA clone IMAGE:5214070), partial cds PA
AK301024.1 Homo sapiens cDNA FLJ56250 complete cds P
AK303846.1 Homo sapiens cDNA FLJ53901 complete cds P

EST sequences (10 of 517) [Show all sequences]

AA983399.1 Clone IMAGE:1598779 uncharacterized tissue 3' read A
AA991572.1 Clone IMAGE:1609734 mammary gland 3' read A
AA994246.1 Clone IMAGE:1625365 mixed 3' read
AA907050.1 Clone IMAGE:1540662 mixed 3' read
AA909280.1 Clone IMAGE:1540987 mixed 3' read P
AA927305.1 Clone IMAGE:1541488 mixed 3' read
AI005456.1 Clone IMAGE:1626236 mixed 3' read A
AI023072.1 Clone IMAGE:1651724 skin 3' read A
AA922205.1 Clone IMAGE:1544076 mixed 3' read
AI056491.1 Clone IMAGE:1669533 brain 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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