Spermatogenesis associated 19 (SPATA19)

Restricted Expression:

testis [show more like this]

germ cell tumor [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

GEO Profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

testis; placenta; uncharacterized tissue; mixed

NCBI

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Finding cDNAs

UGID:142034 UniGene Hs.97541 Homo sapiens (human) SPATA19

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Spermatogenesis associated 19 (SPATA19)

Human protein-coding gene SPATA19. Represented by 33 ESTs from 6 cDNA libraries. EST representation biased toward testis; germ cell tumor. Corresponds to reference sequence NM_174927.1. [UniGene 142034 - Hs.97541]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_777587.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	SPATA19 gene product	H. sapiens	100.0	166
NP_083575.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Spata19 gene product	M. musculus	70.8	153
Other hits (2 of 11) [Show all]		Species	Id(%)	Len(aa)
XP_001157280.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: spermatogenesis-associated protein 19, mitochondrial	P. troglodytes	99.4	166
XP_003911030.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: spermatogenesis-associated protein 19, mitochondrial	P. anubis	95.8	166

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	11
	Map position:	11q25

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

NM_174927.1	Homo sapiens spermatogenesis associated 19 (SPATA19), mRNA	P
AF521713.1	Homo sapiens spergen-1 mRNA, complete cds	P
BC058039.1	Homo sapiens spermatogenesis associated 19, mRNA (cDNA clone MGC:62071 IMAGE:6619434), complete cds	PA
AK098717.1	Homo sapiens cDNA FLJ25851 fis, clone TST09170	P

EST sequences (10 of 33) [Show all sequences]

AA910621.1	Clone IMAGE:1518436	uncharacterized tissue	3' read	A
AI024568.1	Clone IMAGE:1639651	testis	3' read
BX096445.1	Clone IMAGp998N241787_;_IMAGE:728663	testis		P
AI208905.1	Clone IMAGE:1838649	testis	3' read	A
BX338140.2	Clone CS0DI055YL07	placenta	5' read	P
BX369285.2	Clone CS0DI055YL07	placenta	5' read	P
AA861337.1	Clone IMAGE:1407384	testis	3' read
AA861875.1	Clone IMAGE:1408777	testis	3' read	A
EL735859.1		mixed	5' read	P
BU852877.1	Clone IMAGE:6619434	testis	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria