Apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative) (APOBEC4)

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UGID:141952 UniGene Hs.97335 Homo sapiens (human) APOBEC4

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Apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative) (APOBEC4)

Human protein-coding gene APOBEC4. Represented by 34 ESTs from 12 cDNA libraries. Corresponds to reference sequence NM_203454.2. [UniGene 141952 - Hs.97335]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_982279.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	APOBEC4 gene product	H. sapiens	100.0	366
NP_001074666.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Apobec4 gene product	M. musculus	69.4	359
Other hits (2 of 14) [Show all]		Species	Id(%)	Len(aa)
XP_001163612.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: putative C->U-editing enzyme APOBEC-4	P. troglodytes	99.5	366
XP_001114088.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: putative C->U-editing enzyme APOBEC-4-like	M. mulatta	95.9	362

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	testis; mouth; brain; uterus; mixed; pharynx

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	1
	Map position:	1q25.3

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

NM_203454.2	Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative) (APOBEC4), mRNA	PA
BC021711.2	Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative), mRNA (cDNA clone MGC:26594 IMAGE:4826920), complete cds	PA
AK098557.1	Homo sapiens cDNA FLJ25691 fis, clone TST04456	P

EST sequences (10 of 34) [Show all sequences]

BX094690.1	Clone IMAGp998E081784_;_IMAGE:727279	testis
AI961390.1	Clone IMAGE:2508168	uterus	3' read	A
CD684537.1		pharynx
CD710557.1		pharynx
CV024236.1		mixed	5' read	P
DA448055.1	Clone CTONG2019608	mouth	5' read	P
DB039678.1	Clone TESTI2026271	testis	5' read	P
DB314096.1	Clone CTONG2019608	mouth	3' read
DB464397.1	Clone H023010G22	brain	5' read
DB518778.1	Clone H013061B20	testis	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria