> Ubiquilin 1 (UBQLN1)
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UGID:132526     UniGene Hs.9589     Homo sapiens (human)   UBQLN1 Order cDNA clone, Links
Ubiquilin 1 (UBQLN1)

Human protein-coding gene UBQLN1. Represented by 716 ESTs from 285 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 132526 - Hs.9589]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003911902.1 PREDICTED: ubiquilin-1 isoform 1 P. anubis 100.0 588
XP_003312171.1 PREDICTED: LOW QUALITY PROTEIN: ubiquilin-1 P. troglodytes 100.0 588
NP_038466.2 UBQLN1 gene product H. sapiens 100.0 588
NP_081118.4 Ubqln1 gene product M. musculus 96.0 581
NP_001087108.1 ubiquilin 1 X. laevis 87.5 553
NP_998521.2 ubqln4 gene product D. rerio 75.8 597
NP_608344.1 ubiquilin D. melanogaster 57.6 538
NP_179311.1 ubiquitin-like protein A. thaliana 49.2 197
NP_740885.1 Protein UBQL-1, isoform c C. elegans 48.2 278
Other hits (2 of 44) [Show all]SpeciesId(%)Len(aa)
XP_858141.2 PREDICTED: ubiquilin-1 isoform 4 C. lupus familiaris 98.6 588
XP_001916268.2 PREDICTED: LOW QUALITY PROTEIN: ubiquilin-1 E. caballus 98.6 588

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; kidney; lung; uncharacterized tissue; mixed; mammary gland; prostate; lymph node; uterus; intestine; spleen; vascular; adrenal gland; thymus; amniotic fluid; pineal gland; thyroid; esophagus; pancreas; placenta; embryonic tissue; muscle; heart; parathyroid; bladder; liver; skin; trachea; eye; pituitary gland; mouth; ear; connective tissue; bone marrow; ovary; bone; stomach; blood; ascites; cervix; adipose tissue; epididymis
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9q22|9q21.2-q21.3
UniSTS entry: Chr 9 RH91462
UniSTS entry: Chr 9 WI-21584 [Map Viewer]
UniSTS entry: Chr 9 RH94362
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (13)

AK125815.1 Homo sapiens cDNA FLJ43827 fis, clone TESTI4002754
NM_013438.4 Homo sapiens ubiquilin 1 (UBQLN1), transcript variant 1, mRNA PA
AF176069.3 Homo sapiens ubiquilin mRNA, complete cds P
AB209468.1 Homo sapiens mRNA for ubiquilin 1 isoform 1 variant protein P
AF293384.1 Homo sapiens PLIC-1 mRNA, complete cds P
AB035275.1 Homo sapiens DA41 mRNA, complete cds PA
AL136643.1 Homo sapiens mRNA; cDNA DKFZp564L023 (from clone DKFZp564L023) PA
AK027576.1 Homo sapiens cDNA FLJ14670 fis, clone NT2RP2003272, highly similar to Ubiquilin-1 P
AK027556.1 Homo sapiens cDNA FLJ14650 fis, clone NT2RP2002185, highly similar to Ubiquilin-1 P
NM_053067.2 Homo sapiens ubiquilin 1 (UBQLN1), transcript variant 2, mRNA PA
AK074535.1 Homo sapiens cDNA FLJ90054 fis, clone HEMBA1002992 P
BC010066.2 Homo sapiens ubiquilin 1, mRNA (cDNA clone MGC:19622 IMAGE:4110398), complete cds PA
BC039294.1 Homo sapiens ubiquilin 1, mRNA (cDNA clone MGC:39500 IMAGE:5263680), complete cds PA

EST sequences (10 of 716) [Show all sequences]

AA992386.1 Clone IMAGE:1618993 testis 3' read A
AA992516.1 Clone IMAGE:1621962 embryonic tissue 3' read
AA994127.1 Clone IMAGE:1628533 mixed 3' read P
AA887520.1 Clone IMAGE:1500523 lung 3' read P
AA946685.1 Clone IMAGE:1372163 lymph node 3' read P
AI027985.1 Clone IMAGE:1646095 parathyroid 3' read A
AI038707.1 Clone IMAGE:1658321 embryonic tissue 3' read P
AI039448.1 Clone IMAGE:1658369 embryonic tissue 3' read P
AI040454.1 Clone IMAGE:1646993 parathyroid 3' read A
R20208.1 Clone IMAGE:34550 brain 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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