Cytoglobin (CYGB)

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UGID:141719 UniGene Hs.95120 Homo sapiens (human) CYGB

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Cytoglobin (CYGB)

Human protein-coding gene CYGB. Represented by 123 ESTs from 63 cDNA libraries. Corresponds to reference sequence NM_134268.4. [UniGene 141719 - Hs.95120]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_084482.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Cygb gene product	M. musculus	100.0	189
NP_599030.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	CYGB gene product	H. sapiens	100.0	189
NP_001019395.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	cygb2 gene product	D. rerio	75.3	178
NP_001087751.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	cytoglobin	X. laevis	74.7	178
Other hits (2 of 21) [Show all]		Species	Id(%)	Len(aa)
XP_003953243.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: LOW QUALITY PROTEIN: cytoglobin	P. troglodytes	99.5	189
XP_001104888.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: cytoglobin	M. mulatta	98.4	189

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	uncharacterized tissue; brain; mixed; pancreas; placenta; heart; eye; testis; mammary gland; embryonic tissue; kidney; lung; prostate; blood; skin; intestine; stomach; ovary; liver; connective tissue; nerve; bone; spleen; ganglia; uterus; pituitary gland

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	17
Map position:	17q25
UniSTS entry:	Chr 17	RH94299
UniSTS entry:	Chr 17	SHGC-85751

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

BX647425.1	Homo sapiens mRNA; cDNA DKFZp686E0588 (from clone DKFZp686E0588)	A
AJ315162.1	Homo sapiens mRNA for cytoglobin (CYGB gene)	P
AB057769.1	Homo sapiens stap mRNA for stellate cell activation-associated protein, complete cds	P
NM_134268.4	Homo sapiens cytoglobin (CYGB), mRNA	P
BC029798.1	Homo sapiens cytoglobin, mRNA (cDNA clone MGC:34702 IMAGE:5193583), complete cds	PA
AK098057.1	Homo sapiens cDNA FLJ40738 fis, clone TKIDN2004185, weakly similar to GLOBIN	P

EST sequences (10 of 123) [Show all sequences]

AA991936.1	Clone IMAGE:1613472	uncharacterized tissue	3' read	A
AI040055.1	Clone IMAGE:1657613	embryonic tissue	3' read	A
AI093531.1	Clone IMAGE:1695698	uterus	3' read	A
AI140967.1	Clone IMAGE:1750979	brain	3' read
AI141887.1	Clone IMAGE:1691778	heart	3' read	A
AI168242.1	Clone IMAGE:1565744	mixed	3' read	A
AI206980.1	Clone IMAGE:1941384	uncharacterized tissue	3' read	A
AI266650.1	Clone IMAGE:1891685	placenta	3' read	A
AI270658.1	Clone IMAGE:1979317	stomach	3' read	A
AI202149.1	Clone IMAGE:1860142	brain	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria