> Serologically defined colon cancer antigen 3 (SDCCAG3)
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UGID:141653     UniGene Hs.94300     Homo sapiens (human)   SDCCAG3 Order cDNA clone, Links
Serologically defined colon cancer antigen 3 (SDCCAG3)

Human protein-coding gene SDCCAG3. Represented by 380 ESTs from 174 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 141653 - Hs.94300]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001034796.1 SDCCAG3 gene product H. sapiens 100.0 434
XP_531215.2 PREDICTED: serologically defined colon cancer antigen 3 P. troglodytes 100.0 402
NP_080839.2 Sdccag3 gene product M. musculus 86.7 429
Other hits (2 of 13) [Show all]SpeciesId(%)Len(aa)
XP_002799971.1 PREDICTED: serologically defined colon cancer antigen 3-like isoform 2 M. mulatta 98.4 434
XP_003911132.1 PREDICTED: serologically defined colon cancer antigen 3 isoform 2 P. anubis 98.4 434

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; uncharacterized tissue; brain; testis; skin; placenta; lung; pituitary gland; nerve; connective tissue; liver; heart; mouth; cervix; uterus; mammary gland; prostate; bone; pancreas; thyroid; eye; ovary; embryonic tissue; lymph; lymph node; intestine; ascites; kidney; blood; stomach; muscle; tonsil; trachea; spleen; bone marrow
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9q34.3
UniSTS entry: Chr 9 STS-H69662
UniSTS entry: Chr 9 RH70466
UniSTS entry: Chr 1 PMC156606P4
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

AF039688.1 Homo sapiens antigen NY-CO-3 (NY-CO-3) mRNA, partial cds P
AY349357.1 Homo sapiens serologically defined colon cancer antigen 3 (SDCCAG3) mRNA, complete cds; alternatively spliced P
AY129014.1 Homo sapiens clone FP17859 unknown mRNA PA
AK001296.1 Homo sapiens cDNA FLJ10434 fis, clone NT2RP1000481 P
NM_001039708.1 Homo sapiens serologically defined colon cancer antigen 3 (SDCCAG3), transcript variant 3, mRNA PA
NM_001039707.1 Homo sapiens serologically defined colon cancer antigen 3 (SDCCAG3), transcript variant 1, mRNA PA
NM_006643.3 Homo sapiens serologically defined colon cancer antigen 3 (SDCCAG3), transcript variant 2, mRNA PA
BC014515.1 Homo sapiens serologically defined colon cancer antigen 3, mRNA (cDNA clone MGC:966 IMAGE:3547130), complete cds PA

EST sequences (10 of 380) [Show all sequences]

AA947355.1 Clone IMAGE:1374862 ovary
AA969099.1 Clone IMAGE:1580770 mixed 3' read A
AA971082.1 Clone IMAGE:1582225 mixed 3' read A
AA975014.1 Clone IMAGE:1560984 mixed 3' read
AA976975.1 Clone IMAGE:1587524 uncharacterized tissue 3' read P
AA987313.1 Clone IMAGE:1602299 lung 3' read A
AA909616.1 Clone IMAGE:1522955 mixed 3' read A
AI074109.1 Clone IMAGE:1679113 skin 3' read A
AI082456.1 Clone IMAGE:1610808 uncharacterized tissue 3' read
AI092529.1 Clone IMAGE:1689071 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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