> Ubiquitin-conjugating enzyme E2C (UBE2C)
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UGID:141532     UniGene Hs.93002     Homo sapiens (human)   UBE2C Order cDNA clone, Links
Ubiquitin-conjugating enzyme E2C (UBE2C)

Human protein-coding gene UBE2C. Represented by 302 ESTs from 133 cDNA libraries. Corresponds to 6 reference sequences (different isoforms). [UniGene 141532 - Hs.93002]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_514682.2 PREDICTED: ubiquitin-conjugating enzyme E2 C isoform 8 P. troglodytes 100.0 178
NP_008950.1 UBE2C gene product H. sapiens 100.0 178
NP_081061.1 Ube2c gene product M. musculus 98.3 178
NP_001088929.1 ubiquitin-conjugating enzyme E2C X. laevis 88.3 178
NP_001032780.1 ube2c gene product D. rerio 85.8 169
NP_648582.1 vihar D. melanogaster 70.7 167
NP_566653.1 ubiquitin-conjugating enzyme E2 19 A. thaliana 65.9 176
NP_014984.3 putative E2 ubiquitin-protein ligase UBC11 S. cerevisiae 62.6 131
Other hits (2 of 52) [Show all]SpeciesId(%)Len(aa)
XP_001104061.1 PREDICTED: ubiquitin-conjugating enzyme E2 C isoform 1 M. mulatta 99.4 178
XP_003904729.1 PREDICTED: ubiquitin-conjugating enzyme E2 C isoform 1 P. anubis 99.4 178

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; uncharacterized tissue; embryonic tissue; intestine; uterus; brain; lung; thymus; eye; ovary; lymph; pancreas; skin; blood; liver; mammary gland; placenta; testis; stomach; muscle; esophagus; bone marrow; kidney; tonsil; prostate; ascites; bone; vascular; lymph node; ear; heart; pharynx; connective tissue; nerve; larynx
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 20
Map position: 20q13.12
UniSTS entry: Chr 20 STS-T86744
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (17)

BT007300.1 Homo sapiens ubiquitin-conjugating enzyme E2C mRNA, complete cds P
BC050736.1 Homo sapiens ubiquitin-conjugating enzyme E2C, mRNA (cDNA clone MGC:60380 IMAGE:6503915), complete cds PA
NM_181803.1 Homo sapiens ubiquitin-conjugating enzyme E2C (UBE2C), transcript variant 6, mRNA
NM_181802.1 Homo sapiens ubiquitin-conjugating enzyme E2C (UBE2C), transcript variant 5, mRNA PA
NM_181801.2 Homo sapiens ubiquitin-conjugating enzyme E2C (UBE2C), transcript variant 4, mRNA PA
NM_181800.1 Homo sapiens ubiquitin-conjugating enzyme E2C (UBE2C), transcript variant 3, mRNA PA
NM_181799.1 Homo sapiens ubiquitin-conjugating enzyme E2C (UBE2C), transcript variant 2, mRNA PA
NM_007019.2 Homo sapiens ubiquitin-conjugating enzyme E2C (UBE2C), transcript variant 1, mRNA PA
CR456988.1 Homo sapiens full open reading frame cDNA clone RZPDo834D115D for gene UBE2C, ubiquitin-conjugating enzyme E2C; complete cds, incl. stopcodon P
BT020166.1 Homo sapiens ubiquitin-conjugating enzyme E2C mRNA, complete cds P
BT020165.1 Homo sapiens ubiquitin-conjugating enzyme E2C mRNA, complete cds P
BC007656.2 Homo sapiens ubiquitin-conjugating enzyme E2C, mRNA (cDNA clone MGC:1234 IMAGE:3345575), complete cds PA
BC016292.1 Homo sapiens ubiquitin-conjugating enzyme E2C, mRNA (cDNA clone MGC:9617 IMAGE:3910286), complete cds PA
AK311949.1 Homo sapiens cDNA, FLJ92217, highly similar to Homo sapiens ubiquitin-conjugating enzyme E2C (UBE2C), mRNA P
BC032677.2 Homo sapiens ubiquitin-conjugating enzyme E2C, mRNA (cDNA clone IMAGE:5574059), partial cds PA
BC028161.1 Homo sapiens ubiquitin-conjugating enzyme E2C, mRNA (cDNA clone IMAGE:5228503) PA
U73379.1 Human cyclin-selective ubiquitin carrier protein mRNA, complete cds PA

EST sequences (10 of 302) [Show all sequences]

AA974269.1 Clone IMAGE:1586308 uncharacterized tissue 3' read A
AA977854.1 Clone IMAGE:1590315 kidney 3' read
AI097153.1 Clone IMAGE:1707241 heart 3' read PA
BX097753.1 Clone IMAGp998E15659_;_IMAGE:295286 mixed P
AI250679.1 Clone IMAGE:2000864 lymph node 3' read A
AI264541.1 Clone IMAGE:1874767 intestine 3' read P
AI264545.1 Clone IMAGE:1874781 intestine 3' read
CB143441.1 Clone L16HLK3-16-B12 liver 5' read
CB161107.1 Clone L18POOL1n1-28-G02 liver 5' read P
CB106744.1 Clone L3SNU475-10-B10 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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