> Msh homeobox 2 (MSX2)
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UGID:141241     UniGene Hs.89404     Homo sapiens (human)   MSX2 Order cDNA clone, Links
Msh homeobox 2 (MSX2)

Human protein-coding gene MSX2. Represented by 85 ESTs from 44 cDNA libraries. Corresponds to reference sequence NM_002449.4. [UniGene 141241 - Hs.89404]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001129097.2 homeobox protein MSX-2 P. troglodytes 100.0 266
NP_002440.2 MSX2 gene product H. sapiens 100.0 266
XP_001082405.1 PREDICTED: homeobox protein MSX-2-like M. mulatta 99.6 266
XP_003900594.1 PREDICTED: homeobox protein MSX-2 isoform 1 P. anubis 99.6 266
NP_038629.2 Msx2 gene product M. musculus 96.2 266
NP_571351.2 msxd gene product D. rerio 73.8 224
NP_001098740.1 msh homeobox 1 X. laevis 73.1 267
Other hits (2 of 27) [Show all]SpeciesId(%)Len(aa)
XP_001502840.1 PREDICTED: homeobox protein MSX-2-like E. caballus 98.1 266
NP_001073082.1 MSX2 gene product B. taurus 97.4 266

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; placenta; uncharacterized tissue; mammary gland; bladder; pancreas; brain; eye; mixed; uterus; heart; skin; testis; blood; parathyroid; intestine; stomach; esophagus; kidney; lung; ovary
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
Map position: 5q35.2
UniSTS entry: Msx2
UniSTS entry: Chr 5 SHGC-11995 [Map Viewer]
UniSTS entry: Msx2
UniSTS entry: Chr 5 PMC164857P2
UniSTS entry: Chr 5 MSX2_1676
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

BT009814.1 Homo sapiens msh homeo box homolog 2 (Drosophila) mRNA, complete cds P
NM_002449.4 Homo sapiens msh homeobox 2 (MSX2), mRNA PA
D14970.1 Homo sapiens mRNA for HOX-8 protein, partial cds P
D31771.1 Homo sapiens mRNA for MSX-2, complete cds P
BC015509.1 Homo sapiens msh homeobox 2, mRNA (cDNA clone MGC:9173 IMAGE:3903028), complete cds PA
D26145.1 Homo sapiens MSX-2 mRNA, derived full length clone PA
S75361.1 Msx-2 homolog [human, dental pulp-derived cells, mRNA, 2065 nt] PA
D89377.1 Homo sapiens mRNA for MSX-2, complete cds PA

EST sequences (10 of 85) [Show all sequences]

AI138926.1 Clone IMAGE:1713649 placenta 3' read A
AI191653.1 Clone IMAGE:1732608 heart 3' read A
AI218508.1 Clone IMAGE:1844894 mixed 3' read A
R30778.1 Clone IMAGE:133647 placenta 5' read
AI540388.1 Clone IMAGE:2209615 uterus 3' read A
AI738443.1 Clone IMAGE:2391135 intestine 3' read P
BX279937.1 Clone IMAGp998P024352_;_IMAGE:1713649 placenta
CB992823.1 Clone IMAGE:30333544 placenta 5' read P
BX396092.2 Clone CS0DI011YJ07 placenta 5' read
BX329936.2 Clone CS0DI011YJ07 placenta 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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