> V-set and immunoglobulin domain containing 4 (VSIG4)
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UGID:132420     UniGene Hs.8904     Homo sapiens (human)   VSIG4 Order cDNA clone, Links
V-set and immunoglobulin domain containing 4 (VSIG4)

Human protein-coding gene VSIG4. Represented by 371 ESTs from 122 cDNA libraries. EST representation biased toward neonate. Corresponds to 5 reference sequences (different isoforms). [UniGene 132420 - Hs.8904]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001151444.1 PREDICTED: V-set and immunoglobulin domain-containing protein 4 isoform 4 P. troglodytes 100.0 398
NP_009199.1 VSIG4 gene product H. sapiens 100.0 398
NP_808457.1 Vsig4 gene product M. musculus 74.3 269
Other hits (2 of 10) [Show all]SpeciesId(%)Len(aa)
XP_003917861.1 PREDICTED: V-set and immunoglobulin domain-containing protein 4-like, partial P. anubis 95.3 235
XP_001099264.2 PREDICTED: v-set and immunoglobulin domain-containing protein 4 isoform 4 M. mulatta 95.0 403

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: neonate [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: placenta; connective tissue; brain; lung; blood; liver; adrenal gland; adipose tissue; mixed; uterus; umbilical cord; uncharacterized tissue; bone; kidney; bladder; mammary gland; pancreas; eye; testis; heart; intestine; muscle; ovary; stomach; esophagus; trachea; parathyroid; nerve; prostate; pharynx; embryonic tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: Xq12-q13.3
UniSTS entry: Chr X DXS9792
UniSTS entry: Chr X A004A09 [Map Viewer]
UniSTS entry: Chr X DXS7023E [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

AJ132502.1 Homo sapiens mRNA for Z39Ig protein PA
AY358341.1 Homo sapiens clone DNA45416 STIGMA (UNQ317) mRNA, complete cds P
NM_007268.2 Homo sapiens V-set and immunoglobulin domain containing 4 (VSIG4), transcript variant 1, mRNA PA
BC010525.1 Homo sapiens V-set and immunoglobulin domain containing 4, mRNA (cDNA clone MGC:17046 IMAGE:4151604), complete cds PA
NM_001100431.1 Homo sapiens V-set and immunoglobulin domain containing 4 (VSIG4), transcript variant 2, mRNA PA
AK301417.1 Homo sapiens cDNA FLJ60180 complete cds, highly similar to V-set and immunoglobulin domain-containing protein 4 precursor P
AK293215.1 Homo sapiens cDNA FLJ52862 complete cds, highly similar to V-set and immunoglobulin domain-containing protein 4 precursor P
AK298389.1 Homo sapiens cDNA FLJ59945 complete cds, highly similar to V-set and immunoglobulin domain-containing protein 4 precursor P
AK297050.1 Homo sapiens cDNA FLJ58847 complete cds, highly similar to V-set and immunoglobulin domain-containing protein 4 precursor P
AK075171.1 Homo sapiens cDNA FLJ90690 fis, clone PLACE1006277, highly similar to Homo sapiens mRNA for Z39Ig protein P
AK075153.1 Homo sapiens cDNA FLJ90672 fis, clone PLACE1005569, highly similar to V-set and immunoglobulin domain-containing protein 4 precursor P
NM_001184831.1 Homo sapiens V-set and immunoglobulin domain containing 4 (VSIG4), transcript variant 3, mRNA P
NM_001184830.1 Homo sapiens V-set and immunoglobulin domain containing 4 (VSIG4), transcript variant 4, mRNA P
NM_001257403.1 Homo sapiens V-set and immunoglobulin domain containing 4 (VSIG4), transcript variant 5, mRNA PA

EST sequences (10 of 371) [Show all sequences]

R14044.1 Clone IMAGE:26928 brain 5' read P
AA972857.1 Clone IMAGE:1578729 mixed 3' read A
AA993978.1 Clone IMAGE:1628194 mixed 3' read A
AI088635.1 Clone IMAGE:1696290 uterus 3' read A
AI129815.1 Clone IMAGE:1712971 uterus 3' read A
BX117487.1 Clone IMAGp998L18140_;_IMAGE:26928 brain A
AI168499.1 Clone IMAGE:1632643 mammary gland 3' read A
CB164374.1 Clone L17N670205n1-47-A08 liver 5' read
CB164451.1 Clone L17N670205n1-48-A06 liver 5' read P
CB156754.1 Clone B2N807043-21-E11 brain 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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