> Transmembrane protein 47 (TMEM47)
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UGID:132399     UniGene Hs.8769     Homo sapiens (human)   TMEM47 Order cDNA clone, Links
Transmembrane protein 47 (TMEM47)

Human protein-coding gene TMEM47. Represented by 249 ESTs from 101 cDNA libraries. Corresponds to reference sequence NM_031442.3. [UniGene 132399 - Hs.8769]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001082045.1 PREDICTED: transmembrane protein 47 M. mulatta 100.0 180
XP_003917601.1 PREDICTED: transmembrane protein 47 P. anubis 100.0 180
NP_113630.1 TMEM47 gene product H. sapiens 100.0 180
NP_001003045.1 TMEM47 gene product C. lupus familiaris 100.0 180
XP_001925171.1 PREDICTED: transmembrane protein 47-like S. scrofa 100.0 180
NP_001069730.1 TMEM47 gene product B. taurus 100.0 180
XP_001136989.1 PREDICTED: transmembrane protein 47 P. troglodytes 100.0 109
NP_620090.1 Tmem47 gene product M. musculus 98.9 180
NP_001085134.1 transmembrane protein 47 X. laevis 94.4 178
NP_999928.1 tmem47 gene product D. rerio 87.3 180
Other hits (2 of 13) [Show all]SpeciesId(%)Len(aa)
NP_001102787.1 transmembrane protein 47 R. norvegicus 98.9 180
XP_001367153.1 PREDICTED: transmembrane protein 47-like M. domestica 98.3 180

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; vascular; testis; eye; liver; pancreas; kidney; uterus; embryonic tissue; mixed; prostate; bone; uncharacterized tissue; mammary gland; bladder; connective tissue; heart; adrenal gland; muscle; skin; lung; spleen; ear; intestine; stomach; placenta; ovary; thyroid; ganglia; spinal cord; nerve
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: Xp11.4
UniSTS entry: Chr X STS-T48038
UniSTS entry: Chr X RH67914
UniSTS entry: Chr X SHGC-54257
UniSTS entry: Chr X SHGC-132877
UniSTS entry: Chr X STS-N41007
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

AL049257.1 Homo sapiens mRNA; cDNA DKFZp564E153 (from clone DKFZp564E153) A
AL136550.1 Homo sapiens mRNA; cDNA DKFZp761J17121 (from clone DKFZp761J17121) PA
NM_031442.3 Homo sapiens transmembrane protein 47 (TMEM47), mRNA PA
AK311054.1 Homo sapiens cDNA, FLJ18096 P
BC039242.1 Homo sapiens transmembrane protein 47, mRNA (cDNA clone MGC:32949 IMAGE:5277761), complete cds PA

EST sequences (10 of 249) [Show all sequences]

AA993564.1 Clone IMAGE:1624670 embryonic tissue 3' read A
AA995781.1 Clone IMAGE:1606776 kidney 3' read
AI015151.1 Clone IMAGE:1622161 embryonic tissue 3' read A
AI015202.1 Clone IMAGE:1623321 embryonic tissue 3' read A
AI033795.1 Clone IMAGE:1656853 mixed 3' read
AI039075.1 Clone IMAGE:1657498 embryonic tissue 3' read A
CB053514.1 Clone IMAGE:3291099 uncharacterized tissue 3' read
CB053515.1 Clone IMAGE:3291099 uncharacterized tissue 5' read
BX115088.1 Clone IMAGp998F07628_;_IMAGE:283398 brain
AI193470.1 Clone IMAGE:1743276 lung 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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