Canopy 2 homolog (zebrafish) (CNPY2)

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UGID:132394 UniGene Hs.8752 Homo sapiens (human) CNPY2

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Canopy 2 homolog (zebrafish) (CNPY2)

Human protein-coding gene CNPY2. Represented by 380 ESTs from 202 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 132394 - Hs.8752]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
XP_003313634.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: protein canopy homolog 2 isoform 1	P. troglodytes	100.0	181
NP_055070.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	CNPY2 gene product	H. sapiens	100.0	181
XP_004006632.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: protein canopy homolog 2	O. aries	100.0	181
XP_002711123.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: canopy 2 homolog	O. cuniculus	100.0	181
NP_064337.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Cnpy2 gene product	M. musculus	98.3	181
NP_001089620.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	uncharacterized protein LOC734679 precursor	X. laevis	75.0	175
NP_001034915.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	cnpy2 gene product	D. rerio	71.1	172
Other hits (2 of 16) [Show all]		Species	Id(%)	Len(aa)
XP_848863.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: protein canopy homolog 2 isoform 1	C. lupus familiaris	99.5	181
XP_001504883.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: protein canopy homolog 2-like	E. caballus	99.5	181

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	brain; placenta; tonsil; bladder; connective tissue; muscle; spleen; blood; lymph; ascites; pancreas; lung; ovary; liver; skin; testis; embryonic tissue; adrenal gland; mixed; prostate; bone marrow; intestine; adipose tissue; uncharacterized tissue; thyroid; amniotic fluid; vascular; uterus; eye; kidney; stomach; heart; salivary gland; ganglia; bone; mammary gland; thymus; pituitary gland; cervix; lymph node; mouth; parathyroid

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	12
Map position:	12q15
UniSTS entry:	Chr 12	RH69835	[Map Viewer]
UniSTS entry:	Chr 12	STS-T97362	[Map Viewer]
UniSTS entry:	Chr 1	D17S610
UniSTS entry:	Chr 1	D1S1425

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

AB015631.1	Homo sapiens mRNA for type II membrane protein, complete cds, clone:HP10390	P
AY359102.1	Homo sapiens clone DNA93012 TMEM4 (UNQ1943) mRNA, complete cds	P
BC065015.1	Homo sapiens canopy 2 homolog (zebrafish), mRNA (cDNA clone MGC:74660 IMAGE:6169229), complete cds	PA
NM_014255.5	Homo sapiens canopy 2 homolog (zebrafish) (CNPY2), transcript variant 1, mRNA	P
AF186113.1	Homo sapiens putative secreted protein ZSIG9 (ZSIG9) mRNA, complete cds	A
BC001027.2	Homo sapiens canopy 2 homolog (zebrafish), mRNA (cDNA clone IMAGE:3344788), complete cds	A
AK312921.1	Homo sapiens cDNA, FLJ93370, Homo sapiens transmembrane protein 4 (TMEM4), mRNA	P
AY032624.1	Homo sapiens saposin-like protein mRNA, complete cds	P
AL831869.1	Homo sapiens mRNA; cDNA DKFZp547M0716 (from clone DKFZp547M0716)
NM_001190991.1	Homo sapiens canopy 2 homolog (zebrafish) (CNPY2), transcript variant 2, mRNA

EST sequences (10 of 380) [Show all sequences]

AA970472.1	Clone IMAGE:1574763	kidney	3' read	P
AA971165.1	Clone IMAGE:1575398	kidney	3' read
AA987222.1	Clone IMAGE:1603309	lung	3' read	P
R15306.1	Clone IMAGE:29675	brain	5' read
AA923492.1	Clone IMAGE:1534559	kidney	3' read	A
AI004913.1	Clone IMAGE:1632131	mammary gland	3' read	P
R22439.1	Clone IMAGE:130610	placenta	3' read
R22491.1	Clone IMAGE:130610	placenta	5' read
AI123961.1	Clone IMAGE:1694872	uterus	3' read	P
AI128534.1	Clone IMAGE:1714731	placenta	3' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria