> Sorting nexin 33 (SNX33)
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UGID:132382     UniGene Hs.8705     Homo sapiens (human)   SNX33 Order cDNA clone, Links
Sorting nexin 33 (SNX33)

Human protein-coding gene SNX33. Represented by 94 ESTs from 66 cDNA libraries. Corresponds to reference sequence NM_153271.1. [UniGene 132382 - Hs.8705]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_695003.1 SNX33 gene product H. sapiens 100.0 573
XP_001144622.1 PREDICTED: sorting nexin-33 isoform 1 P. troglodytes 99.8 573
XP_001104137.1 PREDICTED: sorting nexin-33-like isoform 2 M. mulatta 99.7 573
XP_003901278.1 PREDICTED: sorting nexin-33 P. anubis 99.7 573
NP_780692.2 sorting nexin-33 M. musculus 96.2 573
NP_001116327.1 snx33 gene product D. rerio 82.4 550
NP_001084772.1 sorting nexin-33 X. laevis 80.7 549
NP_872090.1 Protein LST-4, isoform d C. elegans 45.0 171
Other hits (2 of 24) [Show all]SpeciesId(%)Len(aa)
XP_001491095.1 PREDICTED: sorting nexin-33 E. caballus 98.4 573
XP_001929261.2 PREDICTED: LOW QUALITY PROTEIN: sorting nexin-33 S. scrofa 98.4 573

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: cervix; placenta; pancreas; adipose tissue; heart; embryonic tissue; thyroid; ovary; bladder; skin; intestine; uterus; lung; eye; brain; connective tissue; mammary gland; prostate; kidney; mixed; uncharacterized tissue; muscle; salivary gland; bone; liver; testis
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 15
Map position: 15q24.2
UniSTS entry: Chr 15 RH77791
UniSTS entry: Chr 15 SGC34391 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AK126563.1 Homo sapiens cDNA FLJ44600 fis, clone BLADE2007744 P
EF219141.1 Homo sapiens sorting nexin 30 mRNA, complete cds P
BC018775.1 Homo sapiens sorting nexin 33, mRNA (cDNA clone MGC:32065 IMAGE:4869639), complete cds PA
EF653821.1 Homo sapiens sorting nexin 33 (SNX33) mRNA, complete cds PA
AK091291.1 Homo sapiens cDNA FLJ33972 fis, clone DFNES2001647 P
AL833039.1 Homo sapiens mRNA; cDNA DKFZp666B159 (from clone DKFZp666B159) PA
NM_153271.1 Homo sapiens sorting nexin 33 (SNX33), mRNA PA

EST sequences (10 of 94) [Show all sequences]

AI090012.1 Clone IMAGE:1696189 uterus 3' read A
CB050447.1 Clone IMAGE:3272142 prostate 3' read A
BX103365.1 Clone IMAGp998I154521_;_IMAGE:1847894 mixed
AI269592.1 Clone IMAGE:1847894 mixed 3' read PA
AI302319.1 Clone IMAGE:1908813 lung 3' read
AI344358.1 Clone IMAGE:1917352 kidney 3' read
AI344536.1 Clone IMAGE:1917452 kidney 3' read
R47341.1 Clone e915-r heart
AI570653.1 Clone IMAGE:2164313 brain 3' read
AL048303.2 Clone DKFZp586A0224 uterus P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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