> Calmegin (CLGN)
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UGID:140943     UniGene Hs.86368     Homo sapiens (human)   CLGN Order cDNA clone, Links
Calmegin (CLGN)

Human protein-coding gene CLGN. Represented by 197 ESTs from 66 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 140943 - Hs.86368]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001124147.1 CLGN gene product H. sapiens 100.0 609
NP_034034.2 calmegin precursor M. musculus 87.1 610
NP_001071009.1 clgn gene product D. rerio 71.3 629
NP_001080326.1 calnexin precursor X. laevis 69.1 571
NP_001036767.1 calnexin 99A, isoform D D. melanogaster 57.0 583
NP_001190249.1 calnexin2 A. thaliana 53.7 389
XP_964700.2 hypothetical protein NCU09265 N. crassa 51.8 388
NP_499176.1 Protein CNX-1 C. elegans 48.8 365
XP_001703664.1 predicted protein C. reinhardtii 48.7 262
Other hits (2 of 57) [Show all]SpeciesId(%)Len(aa)
XP_003310574.1 PREDICTED: calmegin P. troglodytes 99.3 569
XP_001089765.1 PREDICTED: calmegin isoform 3 M. mulatta 98.2 609

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; brain; mixed; pancreas; prostate; mammary gland; uncharacterized tissue; lung; liver; heart; pharynx; embryonic tissue; eye; adrenal gland; connective tissue; blood; kidney; uterus; lymph node; bone; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q28.3-q31.1
UniSTS entry: Chr 4 SHGC-67906 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

NM_004362.2 Homo sapiens calmegin (CLGN), transcript variant 1, mRNA PA
AK290819.1 Homo sapiens cDNA FLJ78187 complete cds, highly similar to Homo sapiens calmegin, mRNA P
BC028357.2 Homo sapiens calmegin, mRNA (cDNA clone MGC:26321 IMAGE:4830135), complete cds PA
AK093096.1 Homo sapiens cDNA FLJ35777 fis, clone TESTI2005363, highly similar to CALMEGIN PRECURSOR P
AK299243.1 Homo sapiens cDNA FLJ55357 complete cds, highly similar to Calmegin precursor P
AK302149.1 Homo sapiens cDNA FLJ54199 complete cds, highly similar to Calmegin precursor P
NM_001130675.1 Homo sapiens calmegin (CLGN), transcript variant 2, mRNA PA
D86322.1 Homo sapiens mRNA for calmegin, complete cds PA

EST sequences (10 of 197) [Show all sequences]

AA954444.1 Clone IMAGE:1563503 mixed 3' read A
AA927325.1 Clone IMAGE:1541516 mixed 3' read A
AI004776.1 Clone IMAGE:1626079 mixed 3' read A
AI076607.1 Clone IMAGE:1676909 embryonic tissue 3' read A
AI090752.1 Clone IMAGE:1640181 testis 3' read A
BX088679.1 Clone IMAGp998C182622 testis P
AI174425.1 Clone IMAGE:1701675 kidney 3' read
AI191994.1 Clone IMAGE:1738310 testis 3' read A
AI198909.1 Clone IMAGE:1753922 testis 3' read A
AA885970.1 Clone IMAGE:1274528 bone A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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