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Finding cDNAs
UGID:140759     UniGene Hs.83753     Homo sapiens (human)   SNRPB Order cDNA clone, Links
Small nuclear ribonucleoprotein polypeptides B and B1 (SNRPB)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_001113951.1 PREDICTED: small nuclear ribonucleoprotein polypeptides B and B1 isoform 2 M. mulatta 100.0 239
XP_525398.2 PREDICTED: hypothetical protein LOC470014 isoform 3 P. troglodytes 100.0 239
NP_937859.1 small nuclear ribonucleoprotein polypeptide B/B' isoform B' H. sapiens 100.0 239
XP_861671.1 PREDICTED: similar to Small nuclear ribonucleoprotein associated protein B (snRNP-B) (Sm protein B) (Sm-B) (SmB) isoform 4 C. lupus familiaris 100.0 239
XP_001497533.1 PREDICTED: similar to Small nuclear ribonucleoprotein-associated proteins B and B (snRNP-B) (Sm protein B/B) (Sm-B/Sm-B) (SmB/SmB) isoform 2 E. caballus 100.0 239
NP_001029903.1 small nuclear ribonucleoprotein polypeptide B/B' B. taurus 100.0 239
NP_033251.1 small nuclear ribonucleoprotein B M. musculus 100.0 230
XP_001059527.1 PREDICTED: similar to Small nuclear ribonucleoprotein-associated protein B (snRNP-B) (Sm protein B) (Sm-B) (SmB) R. norvegicus 100.0 230
XP_001362097.1 PREDICTED: hypothetical protein isoform 2 M. domestica 99.6 239
NP_991230.1 small nuclear ribonucleoprotein polypeptides B and B1 D. rerio 97.9 238
NP_001080161.1 small nuclear ribonucleoparticle-associated protein (snRNP) mRNA, clone Sm51 X. laevis 96.6 235
NP_476921.1 small ribonucleoprotein particle protein B D. melanogaster 73.9 198
NP_493348.1 Small Nuclear Ribonucleoprotein family member (snr-2) C. elegans 63.8 159
NP_193777.1 smB (small nuclear ribonucleoprotein associated protein B) A. thaliana 60.3 256

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: skin; lung; brain; embryonic tissue; placenta; pancreas; uterus; eye; liver; intestine; prostate; uncharacterized tissue; kidney; blood; mixed; ovary; mammary gland; muscle; tonsil; stomach; umbilical cord; salivary gland; ascites; lymph; trachea; bladder; lymph node; heart; nerve; thyroid; testis; bone; larynx; cervix; parathyroid; connective tissue; ganglia; adrenal gland; pituitary gland; pineal gland; adipose tissue; vascular; amniotic fluid; thymus; bone marrow; pharynx; spleen; mouth; epididymis; esophagus
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 20
Map position: 20p13
UniSTS entry: Chr 20 (n/a)
UniSTS entry: Chr 20 WI-18905
UniSTS entry: Chr 20 D20S1032
UniSTS entry: (n/a)
UniSTS entry: Chr 2 D11S3114
UniSTS entry: (n/a)
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (29)

M34081.1 Human small nuclear ribonucleoprotein particle SmB mRNA, 3' end P
M34082.1 Human small nuclear ribonucleoprotein particle SmB' mRNA, 3' end P
X17568.1 H.sapiens RNA for snRNP protein B` P
NM_003091.3 Homo sapiens small nuclear ribonucleoprotein polypeptides B and B1 (SNRPB), transcript variant 2, mRNA P
NM_198216.1 Homo sapiens small nuclear ribonucleoprotein polypeptides B and B1 (SNRPB), transcript variant 1, mRNA P
CR456969.1 Homo sapiens full open reading frame cDNA clone RZPDo834B115D for gene SNRPB, small nuclear ribonucleoprotein polypeptides B and B1; complete cds, incl. stopcodon P
CR624875.1 full-length cDNA clone CS0DC009YB22 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) P
CR623855.1 full-length cDNA clone CS0DJ013YD09 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) P
CR622172.1 full-length cDNA clone CS0DD001YO20 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) P
CR620777.1 full-length cDNA clone CS0DD007YJ05 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) P
CR619872.1 full-length cDNA clone CS0DJ004YJ20 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) P
CR619703.1 full-length cDNA clone CS0DC024YA14 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) P
CR615802.1 full-length cDNA clone CS0DC013YF16 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) P
CR609487.1 full-length cDNA clone CS0DL002YA07 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) P
CR607671.1 full-length cDNA clone CS0DJ008YC17 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) P
CR604766.1 full-length cDNA clone CS0DK002YK18 of HeLa cells Cot 25-normalized of Homo sapiens (human) P
CR600173.1 full-length cDNA clone CL0BB014ZD11 of Neuroblastoma of Homo sapiens (human) P
CR598745.1 full-length cDNA clone CS0DK007YA23 of HeLa cells Cot 25-normalized of Homo sapiens (human) P
CR592024.1 full-length cDNA clone CS0DJ014YI06 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) P
BC080516.1 Homo sapiens small nuclear ribonucleoprotein polypeptides B and B1, mRNA (cDNA clone MGC:99669 IMAGE:2822685), complete cds PA
AY742712.1 Homo sapiens small nuclear ribonucleoprotein polypeptide B mRNA, complete cds P
J04564.1 Human snRNP polypeptide B mRNA, complete cds P
AK307266.1 Homo sapiens cDNA, FLJ97214 P
AK307093.1 Homo sapiens cDNA, FLJ97041 P
AK312620.1 Homo sapiens cDNA, FLJ93004, Homo sapiens small nuclear ribonucleoprotein polypeptides B and B1 (SNRPB), mRNA P
AK301206.1 Homo sapiens cDNA FLJ56740 complete cds, highly similar to Small nuclear ribonucleoprotein-associatedproteins B and B' P
AK301034.1 Homo sapiens cDNA FLJ60171 complete cds, highly similar to Small nuclear ribonucleoprotein-associated protein B P
X17567.1 H.sapiens RNA for snRNP protein B P
X15893.1 Human B cod gene for B/B' snRNP associated protein P

EST sequences (10 of 1782) [Show all sequences]

AA961242.1 Clone IMAGE:1552111 uncharacterized tissue 3' read
AA866081.1 Clone IMAGE:1459538 kidney 3' read
AA865003.1 Clone IMAGE:1456535 kidney 3' read A
AA977437.1 Clone IMAGE:1591070 kidney 3' read PA
R15244.1 Clone IMAGE:29658 brain 5' read P
R17082.1 Clone IMAGE:129832 mixed 3' read A
AA910672.1 Clone IMAGE:1520632 kidney 3' read
AA927563.1 Clone IMAGE:1552650 uncharacterized tissue 3' read
AI023673.1 Clone IMAGE:1651925 mixed 3' read A
AI025421.1 Clone IMAGE:1647413 parathyroid 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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