> Syntaxin 4 (STX4)
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UGID:140758     UniGene Hs.83734     Homo sapiens (human)   STX4 Order cDNA clone, Links
Syntaxin 4 (STX4)

Human protein-coding gene STX4. Represented by 257 ESTs from 151 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 140758 - Hs.83734]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_004595.2 STX4 gene product H. sapiens 100.0 296
XP_003916834.1 PREDICTED: syntaxin-4 P. anubis 99.7 296
NP_033320.1 syntaxin-4 M. musculus 97.0 295
NP_001089849.1 syntaxin 4 X. laevis 61.6 294
NP_956515.1 stx4 gene product D. rerio 61.0 295
NP_001022614.1 Protein UNC-64, isoform a C. elegans 46.9 177
NP_524475.1 syntaxin 1A, isoform A D. melanogaster 46.7 225
Other hits (2 of 34) [Show all]SpeciesId(%)Len(aa)
XP_001095454.1 PREDICTED: syntaxin-4-like isoform 1 M. mulatta 99.2 132
XP_002721779.1 PREDICTED: syntaxin 4 O. cuniculus 98.3 295

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: lung; brain; uncharacterized tissue; embryonic tissue; stomach; uterus; prostate; pancreas; thymus; liver; ovary; ganglia; esophagus; cervix; thyroid; spleen; larynx; blood; intestine; mixed; pharynx; pituitary gland; skin; eye; bone; kidney; testis; muscle; placenta; ascites; lymph; nerve; lymph node; connective tissue; mammary gland; heart
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p11.2
UniSTS entry: Chr 16 RH11484
UniSTS entry: Chr 16 RH48799
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

BT007326.1 Homo sapiens syntaxin 4A (placental) mRNA, complete cds P
AF318489.1 Homo sapiens syntaxin 4 (STX4) precursor RNA, complete cds P
NM_004604.4 Homo sapiens syntaxin 4 (STX4), transcript variant 3, mRNA P
CR541806.1 Homo sapiens full open reading frame cDNA clone RZPDo834F0631D for gene STX4A, syntaxin 4A (placental); complete cds, incl. stopcodon P
BC002436.2 Homo sapiens syntaxin 4, mRNA (cDNA clone MGC:1480 IMAGE:3345863), complete cds PA
X85784.1 H.sapiens mRNA for syntaxin 4 P
AK315716.1 Homo sapiens cDNA, FLJ96817, Homo sapiens syntaxin 4A (placental) (STX4A), mRNA P
AK091833.1 Homo sapiens cDNA FLJ34514 fis, clone HLUNG2006599, highly similar to Syntaxin-4 P
AK296652.1 Homo sapiens cDNA FLJ57517 complete cds, highly similar to Syntaxin-4 P
NM_001272095.1 Homo sapiens syntaxin 4 (STX4), transcript variant 1, mRNA
NM_001272096.1 Homo sapiens syntaxin 4 (STX4), transcript variant 2, mRNA
U07158.1 Human syntaxin mRNA, complete cds PA
AJ000541.1 Homo sapiens mRNA for syntaxin 4 precursor P
AF026007.1 Homo sapiens syntaxin 4 (STX4) mRNA, complete cds P

EST sequences (10 of 257) [Show all sequences]

AA973899.1 Clone IMAGE:1569368 lung 3' read
AI000209.1 Clone IMAGE:1636632 kidney 3' read A
AI028179.1 Clone IMAGE:1644567 testis 3' read A
BX091742.1 Clone IMAGp998D10131_;_IMAGE:127833 mixed A
AI184808.1 Clone IMAGE:1724708 placenta 3' read
AI202243.1 Clone IMAGE:1942967 prostate 3' read
CB156159.1 Clone L18POOL1n1-2-C10 liver 5' read P
CB160328.1 Clone L18POOL1n1-15-E02 liver 5' read P
AI289595.1 Clone IMAGE:1991966 uterus 3' read A
AI302501.1 Clone IMAGE:1901400 kidney 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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