Interleukin 1 receptor antagonist (IL1RN)

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Finding cDNAs

UGID:140519 UniGene Hs.81134 Homo sapiens (human) IL1RN

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Interleukin 1 receptor antagonist (IL1RN)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_776213.1	interleukin 1 receptor antagonist isoform 2	H. sapiens	100.0	179
NP_001034790.1	interleukin 1 receptor antagonist isoform 2	M. musculus	77.5	177

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	blood; lung; uncharacterized tissue; mixed; intestine; ear; placenta; pharynx; esophagus; mouth; testis; stomach; uterus; liver; larynx; brain; mammary gland; pancreas; eye; skin; prostate; heart; spleen; tonsil; lymph node; bladder

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	2
Map position:	2q14.2
UniSTS entry:	Chr 2	RH11709
UniSTS entry:	Chr 2	WI-13878
UniSTS entry:	Chr 2	RH17495
UniSTS entry:	Chr 2	D2S2718
UniSTS entry:	Chr 2	(n/a)

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (19)

AJ005835.1	Homo sapiens mRNA for interleukin 1 receptor antagonist, type III
NM_173843.1	Homo sapiens interleukin 1 receptor antagonist (IL1RN), transcript variant 4, mRNA	PA
NM_173842.1	Homo sapiens interleukin 1 receptor antagonist (IL1RN), transcript variant 1, mRNA	PA
NM_173841.1	Homo sapiens interleukin 1 receptor antagonist (IL1RN), transcript variant 2, mRNA	PA
BC068441.1	Homo sapiens interleukin 1 receptor antagonist, mRNA (cDNA clone IMAGE:5270437), partial cds	PA
CR625646.1	full-length cDNA clone CS0DI053YE08 of Placenta Cot 25-normalized of Homo sapiens (human)	P
CR619093.1	full-length cDNA clone CS0DI086YA15 of Placenta Cot 25-normalized of Homo sapiens (human)	P
CR616671.1	full-length cDNA clone CS0DM013YE17 of Fetal liver of Homo sapiens (human)	P
CR606622.1	full-length cDNA clone CS0DI030YP22 of Placenta Cot 25-normalized of Homo sapiens (human)
CR605915.1	full-length cDNA clone CS0DE001YA17 of Placenta of Homo sapiens (human)	P
M55646.1	Human icIL-1ra mRNA, complete cds	P
NM_000577.3	Homo sapiens interleukin 1 receptor antagonist (IL1RN), transcript variant 3, mRNA	PA
BC009745.2	Homo sapiens interleukin 1 receptor antagonist, mRNA (cDNA clone MGC:10430 IMAGE:3689284), complete cds	PA
AK290926.1	Homo sapiens cDNA FLJ77102 complete cds, highly similar to Homo sapiens interleukin 1 receptor antagonist (IL1RN), transcript variant 1, mRNA	P
AK290898.1	Homo sapiens cDNA FLJ75678 complete cds, highly similar to Homo sapiens interleukin 1 receptor antagonist (IL1RN), transcript variant 2, mRNA	P
AF043143.1	Homo sapiens interleukin-1 intracellular receptor antagonist variant (IL1RN) mRNA, partial cds	P
X52015.1	H.sapiens mRNA for interleukin-1 receptor antagonist	P
X53296.1	H.sapiens mRNA for IRAP	P
X84348.1	H.sapiens mRNA for intracellular IL-1 receptor antagonist type II	P

EST sequences (10 of 231) [Show all sequences]

AI023908.1	Clone IMAGE:1652100	mixed	3' read	A
AI090904.1	Clone IMAGE:1689619	mixed	3' read	A
AI190881.1	Clone IMAGE:1733377	testis	3' read
AI250162.1	Clone IMAGE:2004651	pancreas	3' read	A
AI270076.1	Clone IMAGE:1959914	esophagus	3' read
CB142721.1	Clone L7N800102-13-C05	liver	5' read
AI243012.1	Clone IMAGE:1848157	mixed	3' read	A
AI273425.1	Clone IMAGE:1872719	intestine	3' read	A
R34906.1	Clone IMAGE:36844	brain	5' read	P
AI298452.1	Clone IMAGE:1895983	lung	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria