> Ribosomal protein S20 (RPS20)
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UGID:132288     UniGene Hs.8102     Homo sapiens (human)   RPS20 Order cDNA clone, Links
Ribosomal protein S20 (RPS20)

Human protein-coding gene RPS20. Represented by 3807 ESTs from 672 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 132288 - Hs.8102]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001154749.1 PREDICTED: 40S ribosomal protein S20 isoform 3 P. troglodytes 100.0 141
NP_001139699.1 RPS20 gene product H. sapiens 100.0 141
XP_001086172.2 PREDICTED: 40S ribosomal protein S20-like isoform 1 M. mulatta 100.0 122
NP_080423.1 Rps20 gene product M. musculus 100.0 118
XP_001379639.1 PREDICTED: 40S ribosomal protein S20-like M. domestica 100.0 118
XP_003224343.1 PREDICTED: 40S ribosomal protein S20-like A. carolinensis 100.0 118
XP_003967848.1 PREDICTED: 40S ribosomal protein S20-like T. rubripes 100.0 118
XP_002198037.1 PREDICTED: 40S ribosomal protein S20 T. guttata 100.0 118
NP_001117836.1 putative 40S ribosomal protein 20S protein O. mykiss 100.0 118
NP_001134315.1 40S ribosomal protein S20 S. salar 100.0 118
XP_003460147.1 PREDICTED: 40S ribosomal protein S20-like O. niloticus 100.0 118
NP_001086372.1 MGC82136 protein X. laevis 100.0 118
XP_428540.3 PREDICTED: uncharacterized protein LOC430990 G. gallus 100.0 118
XP_003902818.1 PREDICTED: 40S ribosomal protein S20 P. anubis 100.0 118
XP_535079.2 PREDICTED: 40S ribosomal protein S20 C. lupus familiaris 100.0 118
XP_001497631.1 PREDICTED: 40S ribosomal protein S20-like E. caballus 100.0 118
NP_001123426.1 RPS20 gene product S. scrofa 100.0 118
NP_001029610.1 RPS20 gene product B. taurus 100.0 118
XP_004011734.1 PREDICTED: 40S ribosomal protein S20 O. aries 100.0 118
XP_002708159.1 PREDICTED: ribosomal protein S20-like O. cuniculus 100.0 118
NP_998369.1 rps20 gene product D. rerio 99.2 118
NP_524421.1 ribosomal protein S20 D. melanogaster 89.1 118
XP_001697930.1 ribosomal protein S20, component of cytosolic 80S ribosome and 40S small subunit C. reinhardtii 84.3 120
NP_740944.1 Protein RPS-20 C. elegans 81.0 115
NP_001078781.1 40S ribosomal protein S20-1 A. thaliana 75.8 123
XP_959239.1 40S ribosomal protein S20 N. crassa 74.6 113
Other hits (2 of 42) [Show all]SpeciesId(%)Len(aa)
NP_001187083.1 40S ribosomal protein S20 I. punctatus 99.2 118
XP_004080972.1 PREDICTED: 40S ribosomal protein S20-like O. latipes 99.2 118

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; prostate; liver; lung; brain; mixed; intestine; ovary; muscle; eye; uncharacterized tissue; uterus; bone marrow; skin; blood; pancreas; testis; heart; bone; lymph node; connective tissue; placenta; vascular; stomach; umbilical cord; kidney; ascites; mammary gland; ear; cervix; lymph; larynx; parathyroid; spleen; tonsil; thymus; thyroid; adipose tissue; mouth; adrenal gland; pituitary gland; bladder; pharynx; salivary gland; trachea; epididymis; pineal gland; amniotic fluid; nerve; esophagus
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 8
Map position: 8q12
UniSTS entry: Chr 1 D3S3911
UniSTS entry: Chr 8 D8S1961 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

AK130961.1 Homo sapiens cDNA FLJ27451 fis, clone SYN99901, highly similar to 40S ribosomal protein S20 P
NM_001023.3 Homo sapiens ribosomal protein S20 (RPS20), transcript variant 2, mRNA PA
BC087850.1 Homo sapiens ribosomal protein S20, mRNA (cDNA clone MGC:102930 IMAGE:30386230), complete cds PA
L06498.1 Homo sapiens ribosomal protein S20 (RPS20) mRNA, complete cds P
BC007507.2 Homo sapiens ribosomal protein S20, mRNA (cDNA clone MGC:4151 IMAGE:3029762), complete cds PA
AK311808.1 Homo sapiens cDNA, FLJ92069, Homo sapiens ribosomal protein S20 (RPS20), mRNA P
AK301342.1 Homo sapiens cDNA FLJ58953 complete cds, highly similar to 40S ribosomal protein S20 P
D28358.1 Homo sapiens mRNA for ribosomal protein S20, 5'UTR region
NM_001146227.1 Homo sapiens ribosomal protein S20 (RPS20), transcript variant 1, mRNA P

EST sequences (10 of 3807) [Show all sequences]

AA954193.1 Clone IMAGE:1575074 kidney 3' read PA
AA954214.1 Clone IMAGE:1575114 kidney 3' read P
AA865986.1 Clone IMAGE:1459252 kidney 3' read PA
AA961413.1 Clone IMAGE:1597869 uncharacterized tissue 3' read PA
AA961831.1 Clone IMAGE:1600318 uncharacterized tissue 3' read PA
AA961888.1 Clone IMAGE:1598707 uncharacterized tissue 3' read PA
AA969927.1 Clone IMAGE:1581161 mixed 3' read P
AA973522.1 Clone IMAGE:1569197 lung 3' read P
AA975453.1 Clone IMAGE:1558171 lung 3' read P
AA976382.1 Clone IMAGE:1591504 kidney 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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