> Synaptophysin-like 1 (SYPL1)
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UGID:140501     UniGene Hs.80919     Homo sapiens (human)   SYPL1 Order cDNA clone, Links
Synaptophysin-like 1 (SYPL1)

Human protein-coding gene SYPL1. Represented by 1129 ESTs from 347 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 140501 - Hs.80919]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_006745.1 SYPL1 gene product H. sapiens 100.0 258
NP_038663.2 Sypl gene product M. musculus 87.0 260
NP_001085181.1 uncharacterized protein LOC432265 X. laevis 61.0 230
XP_002661387.1 PREDICTED: Synaptophysin-like protein 1-like D. rerio 50.4 235
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
XP_003318784.2 PREDICTED: synaptophysin-like 1 P. troglodytes 98.6 347
XP_001090107.1 PREDICTED: synaptophysin-like 1 isoform 1 M. mulatta 97.7 258

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; kidney; uterus; esophagus; connective tissue; vascular; prostate; placenta; intestine; uncharacterized tissue; liver; lung; bladder; adrenal gland; embryonic tissue; skin; mixed; heart; thymus; spleen; trachea; mouth; thyroid; pancreas; bone marrow; ovary; muscle; bone; larynx; pituitary gland; mammary gland; eye; blood; stomach; pharynx; cervix; parathyroid; ascites; adipose tissue; lymph node; lymph; salivary gland; ganglia; nerve; umbilical cord
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 7
Map position: 7q22.3
UniSTS entry: Chr 7 RH17910
UniSTS entry: Chr 7 STS-H87525
UniSTS entry: Chr 1 D10S275
UniSTS entry: Chr 1 D15S1477
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

NM_182715.2 Homo sapiens synaptophysin-like 1 (SYPL1), transcript variant 2, mRNA PA
AK128299.1 Homo sapiens cDNA FLJ46439 fis, clone THYMU3015962, highly similar to Homo sapiens synaptophysin-like protein (SYPL) PA
AK128279.1 Homo sapiens cDNA FLJ46416 fis, clone THYMU3011827, highly similar to Homo sapiens synaptophysin-like protein (SYPL) P
NM_006754.3 Homo sapiens synaptophysin-like 1 (SYPL1), transcript variant 1, mRNA PA
BC061887.1 Homo sapiens synaptophysin-like 1, mRNA (cDNA clone MGC:75065 IMAGE:5171714), complete cds PA
BC016835.1 Homo sapiens synaptophysin-like 1, mRNA (cDNA clone MGC:10011 IMAGE:3883697), complete cds PA
BC020938.1 Homo sapiens synaptophysin-like 1, mRNA (cDNA clone MGC:24750 IMAGE:4282246), complete cds PA
AK292230.1 Homo sapiens cDNA FLJ75789 complete cds, highly similar to Homo sapiens synaptophysin-like 1 (SYPL1), transcript variant 1, mRNA P
X61382.1 H.sapiens mRNA for a novel synaptophysin related protein P
X68194.1 H.sapiens h-Sp1 mRNA PA
S72481.1 pantophysin [human, keratinocyte line HaCaT, mRNA, 2106 nt] P

EST sequences (10 of 1129) [Show all sequences]

AA969654.1 Clone IMAGE:1574711 kidney 3' read A
AA992685.1 Clone IMAGE:1618458 testis 3' read P
AA992289.1 Clone IMAGE:1620466 testis 3' read P
AA993620.1 Clone IMAGE:1621615 testis 3' read P
AI027519.1 Clone IMAGE:1650411 parathyroid 3' read A
AI040420.1 Clone IMAGE:1646962 parathyroid 3' read
AI041449.1 Clone IMAGE:1648895 parathyroid 3' read A
AI056763.1 Clone IMAGE:1673906 mixed 3' read
AI097524.1 Clone IMAGE:1707134 heart 3' read PA
R22819.1 Clone IMAGE:130321 placenta 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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