|
ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F (ATP6V1F)
Human protein-coding gene ATP6V1F. Represented by 577 ESTs from 214 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 140189 - Hs.78089]
SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
| Best Hits and Hits from model organisms | Species | Id(%) | Len(aa) |
|
|
ATP6V1F gene product |
H. sapiens |
100.0 |
146 |
|
|
Atp6v1f gene product |
M. musculus |
100.0 |
118 |
|
|
Atp6v1f gene product |
R. norvegicus |
100.0 |
118 |
|
|
ATP6V1F gene product |
P. troglodytes |
100.0 |
118 |
|
|
ATP6V1F gene product |
B. taurus |
100.0 |
118 |
|
|
PREDICTED: V-type proton ATPase subunit F |
O. aries |
100.0 |
118 |
|
|
uncharacterized protein LOC403358 |
X. laevis |
86.1 |
121 |
|
|
atp6v1f gene product |
D. rerio |
84.0 |
118 |
|
|
vacuolar H[+] ATPase subunit 14-1 |
D. melanogaster |
72.4 |
122 |
|
|
Protein VHA-9 |
C. elegans |
71.7 |
119 |
| Other hits (2 of 30) [Show all] | Species | Id(%) | Len(aa) |
|
|
PREDICTED: V-type proton ATPase subunit F |
C. lupus familiaris |
99.2 |
118 |
|
|
PREDICTED: V-type proton ATPase subunit F-like |
O. anatinus |
98.3 |
118 |
GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
|
EST Profile: | Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this] |
|
GEO Profiles: |
Experimental gene expression data (Gene Expression Omnibus). |
|
cDNA Sources: |
brain; testis; lung; skin; uncharacterized tissue; mixed; mammary gland; eye; pancreas; spinal cord; placenta; prostate; uterus; adipose tissue; muscle; parathyroid; intestine; heart; stomach; bone marrow; pineal gland; pharynx; lymph node; ovary; liver; embryonic tissue; adrenal gland; kidney; lymph; tonsil; salivary gland; blood; cervix; ascites; vascular; thyroid; spleen; umbilical cord; bone; epididymis; connective tissue |
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.
mRNA sequences (8)
|
NM_004231.3 |
Homo sapiens ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F (ATP6V1F), transcript variant 1, mRNA |
PA |
|
CR456896.1 |
Homo sapiens full open reading frame cDNA clone RZPDo834C037D for gene ATP6V1F, ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F; complete cds, incl. stopcodon |
P |
|
BC104231.1 |
Homo sapiens ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F, mRNA (cDNA clone MGC:126038 IMAGE:40032235), complete cds |
P |
|
BC104230.1 |
Homo sapiens ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F, mRNA (cDNA clone MGC:126037 IMAGE:40032234), complete cds |
P |
|
BC107854.1 |
Homo sapiens ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F, mRNA (cDNA clone MGC:117321 IMAGE:5171984), complete cds |
PA |
|
D49400.1 |
Homo sapiens mRNA for vacuolar ATPase, complete cds |
P |
|
AK312214.1 |
Homo sapiens cDNA, FLJ92503, Homo sapiens ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F(ATP6V1F), mRNA |
P |
|
NM_001198909.1 |
Homo sapiens ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F (ATP6V1F), transcript variant 2, mRNA |
PA |
EST sequences (10 of 577) [Show all sequences]
|
AI022938.1 |
Clone IMAGE:1651741 |
skin |
3' read |
A |
|
AI023127.1 |
Clone IMAGE:1650558 |
parathyroid |
3' read |
A |
|
AI022003.1 |
Clone IMAGE:1655393 |
mixed |
3' read |
PA |
|
AI031671.1 |
Clone IMAGE:1650093 |
parathyroid |
3' read |
A |
|
AI034037.1 |
Clone IMAGE:1646825 |
parathyroid |
3' read |
A |
|
AI042612.1 |
Clone IMAGE:1668132 |
parathyroid |
3' read |
A |
|
AI051355.1 |
Clone IMAGE:1647886 |
parathyroid |
3' read |
A |
|
AI066710.1 |
Clone IMAGE:1682351 |
skin |
3' read |
A |
|
AI075433.1 |
Clone IMAGE:1681853 |
skin |
3' read |
A |
|
AI074972.1 |
Clone IMAGE:1667157 |
skin |
3' read |
A |
Key to Symbols
P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria
|
|
