> High mobility group nucleosomal binding domain 3 (HMGN3)
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UGID:140116     UniGene Hs.77558     Homo sapiens (human)   HMGN3 Order cDNA clone, Links
High mobility group nucleosomal binding domain 3 (HMGN3)

Human protein-coding gene HMGN3. Represented by 545 ESTs from 217 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 140116 - Hs.77558]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001110668.2 PREDICTED: high mobility group nucleosome-binding domain-containing protein 3-like isoform 1 M. mulatta 100.0 129
XP_003897879.1 PREDICTED: high mobility group nucleosome-binding domain-containing protein 3 isoform 3 P. anubis 100.0 129
XP_518599.3 PREDICTED: high mobility group nucleosome-binding domain-containing protein 3 isoform 2 P. troglodytes 100.0 129
NP_001188292.1 HMGN3 gene product H. sapiens 100.0 129
NP_080398.1 Hmgn3 gene product M. musculus 89.9 98
NP_001086985.1 transmembrane protein 5 X. laevis 75.8 95
Other hits (2 of 13) [Show all]SpeciesId(%)Len(aa)
XP_854051.2 PREDICTED: high mobility group nucleosome-binding domain-containing protein 3 isoform 3 C. lupus familiaris 96.9 129
XP_003362414.1 PREDICTED: high mobility group nucleosome-binding domain-containing protein 3-like isoform 3 E. caballus 95.4 129

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; testis; intestine; skin; esophagus; bladder; mixed; uterus; ovary; pituitary gland; pancreas; eye; amniotic fluid; adrenal gland; blood; embryonic tissue; liver; prostate; kidney; muscle; vascular; pharynx; ear; placenta; bone marrow; spinal cord; uncharacterized tissue; bone; nerve; pineal gland; larynx; connective tissue; heart; stomach; mammary gland; spleen; thyroid; lymph node; parathyroid; mouth; thymus; cervix; ascites; tonsil
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6q14.1
UniSTS entry: Chr 6 HSC2GA122 [Map Viewer]
UniSTS entry: Chr 6 RH46791
UniSTS entry: Chr 6 SHGC-33129 [Map Viewer]
UniSTS entry: Chr 6 A003P21 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

BX648085.1 Homo sapiens mRNA; cDNA DKFZp686E20226 (from clone DKFZp686E20226) A
AF274949.1 Homo sapiens PNAS-24 mRNA, complete cds PA
L40357.1 Homo sapiens thyroid receptor interactor (TRIP7) mRNA, 3' end of cds P
AY043282.1 Homo sapiens TRIP7-like protein mRNA, complete cds PA
AF401520.1 Homo sapiens TRIP7 variant protein mRNA, complete cds, alternatively spliced PA
BC009529.2 Homo sapiens high mobility group nucleosomal binding domain 3, mRNA (cDNA clone MGC:10048 IMAGE:3890883), complete cds PA
AK315391.1 Homo sapiens cDNA, FLJ96439, Homo sapiens high mobility group nucleosomal binding domain 3(HMGN3), transcript variant 2, mRNA P
NM_004242.3 Homo sapiens high mobility group nucleosomal binding domain 3 (HMGN3), transcript variant 1, mRNA PA
NM_138730.2 Homo sapiens high mobility group nucleosomal binding domain 3 (HMGN3), transcript variant 2, mRNA PA
NM_001201363.1 Homo sapiens high mobility group nucleosomal binding domain 3 (HMGN3), transcript variant 4, mRNA PA
NM_001201362.1 Homo sapiens high mobility group nucleosomal binding domain 3 (HMGN3), transcript variant 3, mRNA PA

EST sequences (10 of 545) [Show all sequences]

AA984689.1 Clone IMAGE:1630328 brain 3' read P
R18853.1 Clone IMAGE:27042 brain 5' read
AI028183.1 Clone IMAGE:1644576 testis 3' read A
AA928906.1 Clone IMAGE:1568281 lung 3' read
AI075447.1 Clone IMAGE:1681884 skin 3' read A
AI087883.1 Clone IMAGE:1683054 parathyroid 3' read A
AI126749.1 Clone IMAGE:1706925 heart 3' read A
R24082.1 Clone IMAGE:131496 placenta 5' read
CB052364.1 Clone IMAGE:3290220 uncharacterized tissue 5' read A
CB052363.1 Clone IMAGE:3290220 uncharacterized tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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