> Spermidine synthase (SRM)
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UGID:139971     UniGene Hs.76244     Homo sapiens (human)   SRM Order cDNA clone, Links
Spermidine synthase (SRM)

Human protein-coding gene SRM. Represented by 630 ESTs from 210 cDNA libraries. Corresponds to reference sequence NM_003132.2. [UniGene 139971 - Hs.76244]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001102838.1 PREDICTED: spermidine synthase M. mulatta 100.0 301
XP_003891152.1 PREDICTED: spermidine synthase P. anubis 100.0 301
XP_514381.2 PREDICTED: spermidine synthase isoform 3 P. troglodytes 100.0 301
NP_003123.2 SRM gene product H. sapiens 100.0 301
NP_033298.1 Srm gene product M. musculus 98.0 301
NP_001084875.1 spermidine synthase X. laevis 92.4 287
NP_957328.2 srm gene product D. rerio 87.8 287
NP_496723.2 Protein SPDS-1, isoform a C. elegans 68.7 293
NP_015394.1 spermidine synthase S. cerevisiae 68.1 284
XP_960907.1 spermidine synthase N. crassa 67.2 283
NP_731384.1 spermidine synthase, isoform A D. melanogaster 65.5 281
NP_177188.1 Spermidine synthase 2 A. thaliana 57.7 333
XP_001702843.1 spermidine synthase C. reinhardtii 51.1 313
Other hits (2 of 55) [Show all]SpeciesId(%)Len(aa)
NP_445916.1 Srm gene product R. norvegicus 98.3 301
XP_001490409.1 PREDICTED: spermidine synthase-like E. caballus 97.5 283

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; skin; testis; uncharacterized tissue; prostate; umbilical cord; lung; pancreas; intestine; blood; placenta; mammary gland; bone; bladder; uterus; embryonic tissue; kidney; muscle; eye; ovary; lymph node; mixed; stomach; epididymis; lymph; bone marrow; mouth; larynx; heart; connective tissue; ascites; liver; cervix; salivary gland; spleen; pharynx; vascular; pineal gland; adrenal gland; nerve; tonsil
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p36-p22
UniSTS entry: Chr 1 STS-M34338 [Map Viewer]
UniSTS entry: Chr 1 RH70746
UniSTS entry: Chr 1 D11S3114
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

M34338.1 Human spermidine synthase mRNA, complete cds P
NM_003132.2 Homo sapiens spermidine synthase (SRM), mRNA P
BC000309.2 Homo sapiens spermidine synthase, mRNA (cDNA clone MGC:8422 IMAGE:2820975), complete cds PA
BC033106.1 Homo sapiens spermidine synthase, mRNA (cDNA clone MGC:45687 IMAGE:5420683), complete cds PA

EST sequences (10 of 630) [Show all sequences]

AA954853.1 Clone IMAGE:1576212 intestine 3' read
AA976623.1 Clone IMAGE:1585294 lung 3' read
AI077583.1 Clone IMAGE:1666930 skin 3' read
AI089595.1 Clone IMAGE:1695879 uterus 3' read
AI089665.1 Clone IMAGE:1686382 brain 3' read
AI126752.1 Clone IMAGE:1706932 heart 3' read
AI127012.1 Clone IMAGE:1707991 heart 3' read
AI146874.1 Clone IMAGE:1666612 skin 3' read
CB054350.1 Clone IMAGE:3291476 brain 3' read PA
BX116879.1 Clone IMAGp998H06241_;_IMAGE:154037 mammary gland P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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