> N-acetylgalactosaminidase, alpha- (NAGA)
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UGID:139810     UniGene Hs.75372     Homo sapiens (human)   NAGA Order cDNA clone, Links
N-acetylgalactosaminidase, alpha- (NAGA)

Human protein-coding gene NAGA. Represented by 411 ESTs from 151 cDNA libraries. Corresponds to reference sequence NM_000262.2. [UniGene 139810 - Hs.75372]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_000253.1 NAGA gene product H. sapiens 100.0 410
XP_525662.2 PREDICTED: alpha-N-acetylgalactosaminidase P. troglodytes 99.8 410
NP_032695.3 Naga gene product M. musculus 87.2 414
NP_001032465.2 alpha-N-acetylgalactosaminidase D. rerio 71.3 397
NP_001136428.1 N-acetylgalactosaminidase, alpha- precursor X. laevis 67.1 404
NP_609354.1 CG5731 D. melanogaster 58.7 385
NP_506031.1 Protein GANA-1 C. elegans 51.0 386
XP_001690006.1 alpha-galactosidase C. reinhardtii 48.6 181
NP_191190.2 alpha-galactosidase A. thaliana 48.6 282
Other hits (2 of 51) [Show all]SpeciesId(%)Len(aa)
XP_001102266.1 PREDICTED: alpha-N-acetylgalactosaminidase M. mulatta 98.1 365
XP_003905687.1 PREDICTED: alpha-N-acetylgalactosaminidase P. anubis 98.0 344

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; placenta; brain; mixed; skin; lung; prostate; pancreas; muscle; eye; uterus; intestine; kidney; embryonic tissue; testis; liver; connective tissue; stomach; bladder; blood; adrenal gland; ovary; heart; parathyroid; ascites; bone; mammary gland; thyroid; lymph node; esophagus; larynx; bone marrow; mouth; cervix; vascular; pituitary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 22
Map position: 22q11
UniSTS entry: Chr 22 D22S1240
UniSTS entry: Chr 22 RH17702
UniSTS entry: Chr 22 D22S1041
UniSTS entry: Chr 22 WI-7665 [Map Viewer]
UniSTS entry: Chr 22 NAGA__6207
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

M38083.1 Human alpha-N-acetylgalactosaminidase mRNA, complete cds P
NM_000262.2 Homo sapiens N-acetylgalactosaminidase, alpha- (NAGA), mRNA P
M62783.1 Human alpha-N-acetylgalactosaminidase mRNA, complete cds P
CR456527.1 Homo sapiens NAGA full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.NAGA) P
M29276.1 Human alpha-N-acetylgalactosaminidase mRNA, complete cds P
BC000095.2 Homo sapiens N-acetylgalactosaminidase, alpha-, mRNA (cDNA clone MGC:2280 IMAGE:3504221), complete cds PA

EST sequences (10 of 411) [Show all sequences]

AA905434.1 Clone IMAGE:1506194 mixed 3' read A
AA973479.1 Clone IMAGE:1569121 lung 3' read A
AA983892.1 Clone IMAGE:1581519 mixed 3' read A
AI022685.1 Clone IMAGE:1651871 mixed 3' read A
AA923294.1 Clone IMAGE:1550696 uncharacterized tissue 3' read A
AA946922.1 Clone IMAGE:1590146 kidney 3' read A
AI125910.1 Clone IMAGE:1712188 uterus 3' read A
AI126539.1 Clone IMAGE:1713181 uterus 3' read A
R23683.1 Clone IMAGE:33995 brain 5' read
CB049316.1 Clone IMAGE:3271193 prostate 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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