> Glycine amidinotransferase (L-arginine:glycine amidinotransferase) (GATM)
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UGID:139798     UniGene Hs.75335     Homo sapiens (human)   GATM Order cDNA clone, Links
Glycine amidinotransferase (L-arginine:glycine amidinotransferase) (GATM)

Human protein-coding gene GATM. Represented by 821 ESTs from 173 cDNA libraries. Corresponds to reference sequence NM_001482.2. [UniGene 139798 - Hs.75335]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001163621.2 PREDICTED: glycine amidinotransferase, mitochondrial isoform 4 P. troglodytes 100.0 475
NP_001473.1 GATM gene product H. sapiens 100.0 422
NP_080237.1 Gatm gene product M. musculus 97.4 422
NP_001079699.1 glycine amidinotransferase, mitochondrial X. laevis 90.5 421
NP_955825.1 gatm gene product D. rerio 86.2 421
Other hits (2 of 27) [Show all]SpeciesId(%)Len(aa)
XP_003900933.1 PREDICTED: glycine amidinotransferase, mitochondrial P. anubis 98.8 422
XP_001111561.1 PREDICTED: glycine amidinotransferase, mitochondrial isoform 3 M. mulatta 98.6 422

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; kidney; liver; pancreas; testis; placenta; mixed; heart; adrenal gland; bladder; uncharacterized tissue; eye; muscle; stomach; spleen; connective tissue; mammary gland; esophagus; mouth; trachea; lung; embryonic tissue; intestine; uterus; larynx; tonsil; skin; ascites; ovary; ear; adipose tissue; nerve; prostate; bone; vascular; lymph node
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 15
Map position: 15q21.1
UniSTS entry: Chr 15 HSC2JH052 [Map Viewer]
UniSTS entry: Chr 15 STS-S68805 [Map Viewer]
UniSTS entry: Chr 15 RH91509
UniSTS entry: Chr 15 SHGC-35470 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

NM_001482.2 Homo sapiens glycine amidinotransferase (L-arginine:glycine amidinotransferase) (GATM), nuclear gene encoding mitochondrial protein, mRNA PA
AK223585.1 Homo sapiens mRNA for glycine amidinotransferase (L-arginine:glycine amidinotransferase) variant, clone: FCC130D06 P
BC004141.2 Homo sapiens glycine amidinotransferase (L-arginine:glycine amidinotransferase), mRNA (cDNA clone MGC:1744 IMAGE:3010128), complete cds PA
AK098393.1 Homo sapiens cDNA FLJ25527 fis, clone CBR07379, highly similar to GLYCINE AMIDINOTRANSFERASE PRECURSOR (EC 2.1.4.1) P
AK298350.1 Homo sapiens cDNA FLJ56372 complete cds, highly similar to Glycine amidinotransferase, mitochondrial precursor (EC 2.1.4.1) P
AK294995.1 Homo sapiens cDNA FLJ58313 complete cds, highly similar to Glycine amidinotransferase, mitochondrial precursor (EC 2.1.4.1) P
X65706.1 H.sapiens mRNA from tumor suppressor gene (D15S109E)
S68805.1 L-arginine:glycine amidinotransferase [human, kidney carcinoma cells, mRNA, 2330 nt] P

EST sequences (10 of 821) [Show all sequences]

AA888620.1 Clone IMAGE:1437687 liver 3' read A
AI004791.1 Clone IMAGE:1626116 mixed 3' read A
AI017862.1 Clone IMAGE:1636772 kidney 3' read A
R19155.1 Clone IMAGE:129874 mixed 3' read A
AI034077.1 Clone IMAGE:1656096 mixed 3' read A
CB055284.1 Clone IMAGE:3291907 brain 3' read A
CB055285.1 Clone IMAGE:3291907 brain 5' read P
CB069208.1 Clone IMAGE:6364875 pancreas 3' read A
BX115277.1 Clone IMAGp998N091964_;_IMAGE:796616 embryonic tissue
AI222626.1 Clone IMAGE:1762000 kidney 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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