> Ubiquitination factor E4A (UBE4A)
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UGID:139778     UniGene Hs.75275     Homo sapiens (human)   UBE4A Order cDNA clone, Links
Ubiquitination factor E4A (UBE4A)

Human protein-coding gene UBE4A. Represented by 464 ESTs from 241 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 139778 - Hs.75275]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_508791.2 PREDICTED: ubiquitin conjugation factor E4 A isoform 7 P. troglodytes 100.0 1072
NP_004779.2 UBE4A gene product H. sapiens 100.0 1072
XP_003910829.1 PREDICTED: ubiquitin conjugation factor E4 A isoform 2 P. anubis 99.9 1072
XP_001097911.2 PREDICTED: ubiquitin conjugation factor E4 A isoform 3 M. mulatta 99.5 1068
NP_663375.3 ubiquitin conjugation factor E4 A M. musculus 98.0 1027
NP_001084506.1 ubiquitination factor E4A X. laevis 84.6 1068
XP_001922961.2 PREDICTED: ubiquitin conjugation factor E4 A isoform 1 D. rerio 83.5 1072
NP_609060.1 CG11070 D. melanogaster 53.4 395
NP_568313.2 putative ubiquitin conjugation factor E4 A. thaliana 46.5 217
Other hits (2 of 39) [Show all]SpeciesId(%)Len(aa)
XP_001502891.3 PREDICTED: ubiquitin conjugation factor E4 A E. caballus 99.4 1066
XP_850081.1 PREDICTED: ubiquitin conjugation factor E4 A isoform 2 C. lupus familiaris 99.3 1065

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; testis; blood; mouth; heart; lung; stomach; placenta; bone; ovary; thyroid; esophagus; mammary gland; skin; uterus; intestine; prostate; kidney; lymph node; thymus; ear; liver; muscle; eye; connective tissue; embryonic tissue; uncharacterized tissue; bone marrow; trachea; bladder; spinal cord; parathyroid; ascites; pancreas; vascular; pharynx; nerve; adrenal gland; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11q23.3
UniSTS entry: Chr 11 STS-AA019500
UniSTS entry: Chr 3 NIB1965
UniSTS entry: Chr 11 RH18212
UniSTS entry: Chr 3 SHGC-87656
UniSTS entry: Chr 11 RH25349
UniSTS entry: Chr 1 D1S1361
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

BC052643.1 Homo sapiens ubiquitination factor E4A (UFD2 homolog, yeast), mRNA (cDNA clone IMAGE:6163275), partial cds PA
NM_004788.3 Homo sapiens ubiquitination factor E4A (UBE4A), transcript variant 1, mRNA PA
BC062695.1 Homo sapiens ubiquitination factor E4A (UFD2 homolog, yeast), mRNA (cDNA clone IMAGE:6668039), partial cds PA
BC112367.1 Homo sapiens ubiquitination factor E4A (UFD2 homolog, yeast), mRNA (cDNA clone MGC:133315 IMAGE:40038767), complete cds P
BC111417.1 Homo sapiens ubiquitination factor E4A (UFD2 homolog, yeast), mRNA (cDNA clone MGC:133316 IMAGE:40038776), complete cds P
D50916.1 Homo sapiens mRNA for KIAA0126 gene, partial cds P
AK307737.1 Homo sapiens cDNA, FLJ97685 P
AK296369.1 Homo sapiens cDNA FLJ61095 partial cds, highly similar to Ubiquitin conjugation factor E4 A P
BC030973.1 Homo sapiens ubiquitination factor E4A (UFD2 homolog, yeast), mRNA (cDNA clone IMAGE:4328023), partial cds PA
BC010938.1 Homo sapiens ubiquitination factor E4A (UFD2 homolog, yeast), mRNA (cDNA clone IMAGE:4279309), with apparent retained intron PA
AF087968.1 Homo sapiens full length insert cDNA clone YU52C09 P
AK302328.1 Homo sapiens cDNA FLJ51394 complete cds, highly similar to Ubiquitin conjugation factor E4 A P
NM_001204077.1 Homo sapiens ubiquitination factor E4A (UBE4A), transcript variant 2, mRNA PA
BC039240.1 Homo sapiens ubiquitination factor E4A (UFD2 homolog, yeast), mRNA (cDNA clone IMAGE:4724239), with apparent retained intron PA

EST sequences (10 of 464) [Show all sequences]

AA969361.1 Clone IMAGE:1560886 mixed 3' read P
AA974993.1 Clone IMAGE:1560957 mixed 3' read A
AA987376.1 Clone IMAGE:1603359 lung 3' read A
AI022079.1 Clone IMAGE:1655056 mixed 3' read
AI053898.1 Clone IMAGE:1862189 ovary 3' read
AI076160.1 Clone IMAGE:1673341 mixed 3' read P
AI079302.1 Clone IMAGE:1677452 mixed 3' read A
AI089051.1 Clone IMAGE:1634555 mixed 3' read A
R24978.1 Clone IMAGE:35293 brain 5' read
AI192895.1 Clone IMAGE:1743678 lung 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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