> Cytoskeleton-associated protein 4 (CKAP4)
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UGID:139663     UniGene Hs.74368     Homo sapiens (human)   CKAP4 Order cDNA clone, Links
Cytoskeleton-associated protein 4 (CKAP4)

Human protein-coding gene CKAP4. Represented by 630 ESTs from 263 cDNA libraries. Corresponds to reference sequence NM_006825.3. [UniGene 139663 - Hs.74368]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_006816.2 CKAP4 gene product H. sapiens 100.0 601
NP_780660.1 cytoskeleton-associated protein 4 M. musculus 88.7 574
Other hits (2 of 16) [Show all]SpeciesId(%)Len(aa)
XP_001161127.2 PREDICTED: cytoskeleton-associated protein 4 P. troglodytes 99.2 643
XP_003907132.1 PREDICTED: LOW QUALITY PROTEIN: cytoskeleton-associated protein 4 P. anubis 98.7 595

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: skin; embryonic tissue; liver; brain; lung; eye; connective tissue; uterus; mammary gland; pharynx; muscle; larynx; cervix; kidney; uncharacterized tissue; pancreas; placenta; mixed; ovary; intestine; thymus; prostate; vascular; bone; stomach; bladder; ear; lymph; ascites; testis; blood; heart; adrenal gland; salivary gland; umbilical cord; spleen; lymph node; mouth; amniotic fluid; bone marrow; trachea; esophagus
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12q23.3
UniSTS entry: Chr 12 D12S1903 [Map Viewer]
UniSTS entry: Chr 12 RH17418 [Map Viewer]
UniSTS entry: Chr 12 STS-X69910 [Map Viewer]
UniSTS entry: Chr 12 G20771
UniSTS entry: Chr 12 A006F36 [Map Viewer]
UniSTS entry: Chr 12 WI-20313 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AK123693.1 Homo sapiens cDNA FLJ41699 fis, clone HCHON2004776, highly similar to Homo sapiens cytoskeleton-associated protein 4 (CKAP4), mRNA P
NM_006825.3 Homo sapiens cytoskeleton-associated protein 4 (CKAP4), mRNA PA
BC067357.1 Homo sapiens cytoskeleton-associated protein 4, mRNA (cDNA clone IMAGE:6082888), partial cds PA
BC082972.1 Homo sapiens cytoskeleton-associated protein 4, mRNA (cDNA clone MGC:99554 IMAGE:6084968), complete cds PA
AK223563.1 Homo sapiens mRNA for cytoskeleton-associated protein 4 variant, clone: FCC128B02 P
BC094824.1 Homo sapiens cytoskeleton-associated protein 4, mRNA (cDNA clone MGC:104815 IMAGE:6374931), complete cds PA
BC015436.2 Homo sapiens cytoskeleton-associated protein 4, mRNA (cDNA clone IMAGE:4415313), partial cds A
BC025341.1 Homo sapiens, Similar to cytoskeleton-associated protein 4, clone IMAGE:5093829, mRNA, partial cds PA
S74539.1 BM10=hepatic protein HEP1/protein kinase homolog [human, bone marrow, mRNA Partial, 198 nt]
X69910.2 Homo sapiens p63 mRNA for transmembrane protein PA
BC037578.1 Homo sapiens, clone IMAGE:5555983, mRNA P

EST sequences (10 of 630) [Show all sequences]

AA836831.1 Clone IMAGE:1422669 kidney
R14490.1 Clone IMAGE:28762 brain 5' read
AA984105.1 Clone IMAGE:1616405 brain 3' read
AA906204.1 Clone IMAGE:1506699 mixed 3' read
AA922849.1 Clone IMAGE:1457376 intestine 3' read P
AI056664.1 Clone IMAGE:1676472 embryonic tissue 3' read
AI061337.1 Clone IMAGE:1700775 kidney 3' read P
AI073995.1 Clone IMAGE:1670793 uncharacterized tissue 3' read A
AI074012.1 Clone IMAGE:1670825 uncharacterized tissue 3' read P
AI075630.1 Clone IMAGE:1666872 skin 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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