> Apolipoprotein C-III (APOC3)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:139599     UniGene Hs.73849     Homo sapiens (human)   APOC3 Order cDNA clone, Links
Apolipoprotein C-III (APOC3)

Human protein-coding gene APOC3. Represented by 139 ESTs from 30 cDNA libraries. EST representation biased toward liver tumor; fetus. Corresponds to reference sequence NM_000040.1. [UniGene 139599 - Hs.73849]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_000031.1 APOC3 gene product H. sapiens 100.0 98
Other hits (2 of 3) [Show all]SpeciesId(%)Len(aa)
XP_529442.3 PREDICTED: apolipoprotein C-III isoform 2 P. troglodytes 98.0 98
XP_003910790.1 PREDICTED: apolipoprotein C-III isoform 1 P. anubis 87.9 98

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: liver tumor [show more like this]
fetus [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: liver; mixed; spleen; uncharacterized tissue; kidney; connective tissue; embryonic tissue; lung; cervix; brain; heart; muscle
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11q23.3
UniSTS entry: Chr 11 D11S4370 [Map Viewer]
UniSTS entry: Chr 11 RH66448 [Map Viewer]
UniSTS entry: Chr 11 GDB:178433
UniSTS entry: Chr 11 G44717
UniSTS entry: Chr 11 D11S4435 [Map Viewer]
UniSTS entry: Chr 11 GDB:636456
UniSTS entry: Chr 11 REN72961
UniSTS entry: Chr 11 REN72966
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

NM_000040.1 Homo sapiens apolipoprotein C-III (APOC3), mRNA P
M28613.1 Human apolipoprotein C-III (apoC-III) mRNA, complete cds, clone pCIII-607 P
M28614.1 Human apolipoprotein C-III (apoC-III) mRNA, complete cds, clone pCIII-655-2 P
V01513.1 Human messenger fragment encoding apolipoprotein C-III (apo C-III)
BC121081.1 Homo sapiens apolipoprotein C-III, mRNA (cDNA clone MGC:150353 IMAGE:40119733), complete cds P
BC134419.1 Homo sapiens apolipoprotein C-III, mRNA (cDNA clone MGC:161914 IMAGE:40119734), complete cds P
X00567.1 Human mRNA for lipoprotein apoCIII P
X01388.1 Human mRNA for pre-apolipoprotein CIII PA
BC027977.1 Homo sapiens apolipoprotein C-III, mRNA (cDNA clone MGC:34519 IMAGE:5229117), complete cds PA

EST sequences (10 of 139) [Show all sequences]

AA909307.1 Clone IMAGE:1542896 mixed 3' read A
AI141036.1 Clone IMAGE:1678120 mixed 3' read A
AI141285.1 Clone IMAGE:1690437 mixed 3' read A
CB158496.1 Clone L19N779227-1-H09 liver 5' read
AI242024.1 Clone IMAGE:1851056 mixed 3' read PA
AI279634.1 Clone IMAGE:1927914 lung 3' read
AI288895.1 Clone IMAGE:1879720 mixed 3' read A
AI373881.1 Clone IMAGE:2030524 kidney 3' read PA
BX331028.2 Clone CS0DK008YC08 cervix 3' read A
BX406766.2 Clone CS0DM013YF04 liver 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help