RNA binding protein S1, serine-rich domain (RNPS1)

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UGID:5796829 UniGene Hs.733012 Homo sapiens (human) RNPS1

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RNA binding protein S1, serine-rich domain (RNPS1)

Human protein-coding gene RNPS1. Represented by 77 ESTs from 56 cDNA libraries. [UniGene 5796829 - Hs.733012]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
XP_001514313.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: RNA-binding protein with serine-rich domain 1-like	O. anatinus	87.7	179
NP_001073596.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	RNA-binding protein with serine-rich domain 1 isoform 1	M. musculus	81.3	267
NP_542161.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	RNPS1 gene product	H. sapiens	81.3	267
NP_001090114.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	RNA-binding protein with serine-rich domain 1-B	X. laevis	54.1	181
NP_956055.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	rnps1 gene product	D. rerio	51.7	180
Other hits (2 of 18) [Show all]		Species	Id(%)	Len(aa)
XP_002723548.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: RNA-binding protein S1, serine-rich domain-like	O. cuniculus	86.3	219
XP_001367597.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: RNA-binding protein with serine-rich domain 1-like	M. domestica	84.9	219

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	brain; prostate; muscle; liver; pancreas; eye; kidney; placenta; skin; testis; ovary; embryonic tissue; thyroid; intestine; spleen; ear; ascites; mammary gland; blood; lung; cervix; heart; mouth; bone

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	16
Map position:	16p13.3
UniSTS entry:	Chr 16	RH79853
UniSTS entry:	Chr 16	RH69048
UniSTS entry:	Chr 1	sY3084
UniSTS entry:	Chr 16	SHGC-67834

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (1)

AK021799.1

Homo sapiens cDNA FLJ11737 fis, clone HEMBA1005469

EST sequences (10 of 77) [Show all sequences]

AA977237.1	Clone IMAGE:1558787	lung	3' read
CB127335.1	Clone C1SNU17-9-G01	cervix	5' read
BX282278.1	Clone IMAGp998E1111420_;_IMAGE:5169010	brain
AI937660.1	Clone IMAGE:2468236	brain	3' read
AI372730.1	Clone UHIB57R	brain	5' read
BX365315.2	Clone CS0DI073YB17	placenta	5' read
BX443638.2	Clone CS0DH006YG13	blood	5' read	P
AI207559.1		liver
CD240171.1		blood
CK826485.1	Clone IMAGE:6132731	pancreas	5' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria