> Cyclic nucleotide binding domain containing 2 (CNBD2)
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UGID:5796514     UniGene Hs.732697     Homo sapiens (human)   CNBD2 Order cDNA clone, Links
Cyclic nucleotide binding domain containing 2 (CNBD2)

Human protein-coding gene CNBD2. Represented by 45 ESTs from 18 cDNA libraries. EST representation biased toward soft tissue/muscle tissue tumor. Corresponds to 2 reference sequences (different isoforms). [UniGene 5796514 - Hs.732697]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_543024.2 CNBD2 gene product H. sapiens 100.0 571
NP_081861.2 Cnbd2 gene product M. musculus 68.7 610
Other hits (2 of 11) [Show all]SpeciesId(%)Len(aa)
XP_525312.3 PREDICTED: uncharacterized protein C20orf152-like isoform 2 P. troglodytes 99.0 571
XP_003904849.1 PREDICTED: uncharacterized protein C20orf152 homolog isoform 1 P. anubis 95.0 580

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: soft tissue/muscle tissue tumor [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; testis; brain; connective tissue; mixed; lung; kidney; ascites
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 20
Map position: 20q11.23
UniSTS entry: Chr 1 L18426
UniSTS entry: Chr 1 D11S2875
UniSTS entry: Chr 1 D11S3114
UniSTS entry: Chr 1 D8S2278
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

BC057288.1 Homo sapiens chromosome 20 open reading frame 152, mRNA (cDNA clone IMAGE:4824230) A
BC114945.1 Homo sapiens chromosome 20 open reading frame 152, mRNA (cDNA clone MGC:138880 IMAGE:40084218), complete cds P
AK057454.1 Homo sapiens cDNA FLJ32892 fis, clone TESTI2004982, weakly similar to CGMP-DEPENDENT PROTEIN KINASE 1, ALPHA ISOZYME (EC 2.7.1.37) P
NM_080834.2 Homo sapiens cyclic nucleotide binding domain containing 2 (CNBD2), transcript variant 1, mRNA PA
BC030782.1 Homo sapiens chromosome 20 open reading frame 152, mRNA (cDNA clone IMAGE:4824231), complete cds A
NM_001207076.1 Homo sapiens cyclic nucleotide binding domain containing 2 (CNBD2), transcript variant 2, mRNA PA

EST sequences (10 of 45) [Show all sequences]

AA905322.1 Clone IMAGE:1506511 mixed 3' read
BX097319.1 Clone IMAGp998C14695_;_IMAGE:309061 lung A
BX101299.1 Clone IMAGp998A014406_;_IMAGE:1734024 testis P
AI191598.1 Clone IMAGE:1734024 testis 3' read PA
AI765510.1 Clone IMAGE:2399683 kidney 3' read PA
BX420805.1 Clone CS0DF034YD09 brain 3' read P
AW340269.1 Clone IMAGE:2908435 mixed 3' read
CD635973.1 uncharacterized tissue P
CD635974.1 uncharacterized tissue P
BF439347.1 Clone IMAGE:3272443 mixed 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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