> Carbonic anhydrase VB pseudogene 1 (CA5BP1)
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UGID:5796061     UniGene Hs.732244     Homo sapiens (human)   CA5BP1 Links
Carbonic anhydrase VB pseudogene 1 (CA5BP1)

Human pseudo gene CA5BP1. Represented by 134 ESTs from 79 cDNA libraries. Corresponds to reference sequence NR_026551.1. [UniGene 5796061 - Hs.732244]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001101899.1 PREDICTED: carbonic anhydrase 5B, mitochondrial-like M. mulatta 69.7 142
XP_003917488.1 PREDICTED: carbonic anhydrase 5B, mitochondrial-like P. anubis 69.7 142
XP_001139130.1 PREDICTED: carbonic anhydrase 5B, mitochondrial P. troglodytes 69.7 142
NP_009151.1 CA5B gene product H. sapiens 69.7 142
NP_851832.2 Car5b gene product M. musculus 63.3 158
Other hits (2 of 11) [Show all]SpeciesId(%)Len(aa)
XP_002719936.1 PREDICTED: carbonic anhydrase VB, mitochondrial O. cuniculus 67.6 142
XP_001926850.1 PREDICTED: carbonic anhydrase 5B, mitochondrial-like S. scrofa 67.4 141

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; connective tissue; liver; uncharacterized tissue; skin; lung; uterus; thyroid; testis; placenta; muscle; blood; parathyroid; prostate; stomach; ascites; salivary gland; bone; lymph node; intestine; mammary gland; cervix; bone marrow; mixed; kidney; pancreas; eye; larynx
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: Xp22.2
UniSTS entry: Chr X G31008
UniSTS entry: Chr X RH78665 [Map Viewer]
UniSTS entry: Chr X RH103251
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

BC021816.1 Homo sapiens carbonic anhydrase VB pseudogene, mRNA (cDNA clone IMAGE:3460742)
AK095608.1 Homo sapiens cDNA FLJ38289 fis, clone FCBBF3008475
BC032506.1 Homo sapiens, clone IMAGE:5244869, mRNA
NR_026551.1 Homo sapiens carbonic anhydrase VB pseudogene 1 (CA5BP1), non-coding RNA

EST sequences (10 of 134) [Show all sequences]

AA972319.1 Clone IMAGE:1582910 mixed 3' read
AA975463.1 Clone IMAGE:1558192 lung 3' read
AA994229.1 Clone IMAGE:1631165 mammary gland 3' read
AA947152.1 Clone IMAGE:1553407 kidney 3' read
AI038537.1 Clone IMAGE:1658617 embryonic tissue 3' read
AI075361.1 Clone IMAGE:1682140 skin 3' read
AI074176.1 Clone IMAGE:1637201 kidney 3' read A
AI080459.1 Clone IMAGE:1610778 uncharacterized tissue 3' read
AI086962.1 Clone IMAGE:1680140 skin 3' read
AI342518.1 Clone IMAGE:1949342 uterus 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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