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UGID:5795911     UniGene Hs.732094     Homo sapiens (human)   C6orf147
Chromosome 6 open reading frame 147 (C6orf147)

Human miscRNA gene C6orf147. Represented by 24 ESTs from 16 cDNA libraries. Corresponds to reference sequence NR_027005.1. [UniGene 5795911 - Hs.732094]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003903117.1 PREDICTED: eukaryotic translation initiation factor 3 subunit E isoform 1 P. anubis 92.5 186
NP_032414.1 Eif3e gene product M. musculus 92.3 182
NP_001011990.1 Eif3e gene product R. norvegicus 92.3 182
XP_001090593.1 PREDICTED: eukaryotic translation initiation factor 3 subunit E-like isoform 5 M. mulatta 92.3 182
NP_001559.1 EIF3E gene product H. sapiens 92.3 182
XP_532304.2 PREDICTED: eukaryotic translation initiation factor 3 subunit E isoform 2 C. lupus familiaris 92.3 182
XP_001495193.1 PREDICTED: eukaryotic translation initiation factor 3 subunit E E. caballus 92.3 182
NP_001029775.1 EIF3E gene product B. taurus 92.3 182
XP_004011834.1 PREDICTED: eukaryotic translation initiation factor 3 subunit E O. aries 92.3 182
XP_002710778.1 PREDICTED: eukaryotic translation initiation factor 3, subunit 6 48kDa O. cuniculus 92.3 182
NP_001089321.1 eukaryotic translation initiation factor 3 subunit E-B X. laevis 87.4 183
NP_001038416.1 eukaryotic translation initiation factor 3 subunit E-B D. rerio 86.3 183
NP_567047.1 translation initiation factor eIF-3 subunit 6 A. thaliana 45.8 177
Other hits (2 of 28) [Show all]SpeciesId(%)Len(aa)
XP_002199156.1 PREDICTED: eukaryotic translation initiation factor 3, subunit E T. guttata 91.7 157
XP_003205279.1 PREDICTED: eukaryotic translation initiation factor 3 subunit E-like M. gallopavo 90.7 182

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; liver; kidney; testis; ascites; embryonic tissue; lung; pituitary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6q13
UniSTS entry: Chr 6 REN32192
UniSTS entry: Chr 6 stSG625803
UniSTS entry: Chr 6 G19931
UniSTS entry: Chr 6 A002C29
UniSTS entry: Chr 6 REN32266
UniSTS entry: Chr 6 REN32334
UniSTS entry: Chr 6 REN32265
UniSTS entry: Chr 6 REN32267
UniSTS entry: Chr 6 REN32329
UniSTS entry: Chr 6 REN32330
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

AK090984.1 Homo sapiens cDNA FLJ33665 fis, clone BRAMY2027739
NR_027005.1 Homo sapiens chromosome 6 open reading frame 147 (C6orf147), non-coding RNA A

EST sequences (10 of 24) [Show all sequences]

AI140650.1 Clone IMAGE:1739707 lung 3' read
AI493466.1 Clone IMAGE:2019769 brain 3' read A
R56183.1 Clone IMAGE:40684 brain 5' read P
CD105755.1 Clone IMAGE:30367744 pituitary gland 5' read P
AW088170.1 Clone IMAGE:2592320 brain 3' read A
CN313752.1 embryonic tissue 5' read P
CV356208.1 brain
BE701958.1 brain
BE701990.1 brain
BE936137.1 brain


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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