> Chromosome 5 open reading frame 28 (C5orf28)
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UGID:5795910     UniGene Hs.732093     Homo sapiens (human)   C5orf28 Order cDNA clone, Links
Chromosome 5 open reading frame 28 (C5orf28)

Human protein-coding gene C5orf28. Represented by 125 ESTs from 80 cDNA libraries. Corresponds to reference sequence NM_022483.4. [UniGene 5795910 - Hs.732093]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001135483.1 PREDICTED: transmembrane protein C5orf28 homolog isoform 1 P. troglodytes 100.0 214
NP_071928.2 C5orf28 gene product H. sapiens 100.0 214
XP_003945991.1 PREDICTED: transmembrane protein C5orf28 homolog M. musculus 78.6 237
NP_001086617.1 transmembrane protein C5orf28 homolog X. laevis 77.7 214
NP_001003574.1 si:busm1-79m10.4 gene product D. rerio 68.4 214
Other hits (2 of 17) [Show all]SpeciesId(%)Len(aa)
XP_003899687.1 PREDICTED: transmembrane protein C5orf28 homolog P. anubis 96.1 178
XP_003434587.1 PREDICTED: transmembrane protein C5orf28 C. lupus familiaris 94.9 214

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; eye; mammary gland; vascular; liver; lung; lymph; bladder; testis; kidney; uterus; pancreas; uncharacterized tissue; heart; placenta; mixed; ovary; pituitary gland; bone marrow; blood; pharynx; muscle; skin; intestine; bone; connective tissue; salivary gland; prostate; stomach; adipose tissue; ascites; ganglia
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
Map position: 5p12
UniSTS entry: Chr 5 RH46937
UniSTS entry: Chr 1 D16S325
UniSTS entry: Chr 1 L17705
UniSTS entry: Chr 1 PMC156606P2
UniSTS entry: Chr 1 PMC156606P3
UniSTS entry: Chr 1 D8S2278
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

BC063832.1 Homo sapiens chromosome 5 open reading frame 28, mRNA (cDNA clone MGC:74718 IMAGE:6178186), complete cds PA
AL137306.1 Homo sapiens mRNA; cDNA DKFZp586K1417 (from clone DKFZp586K1417) A
BC073852.1 Homo sapiens chromosome 5 open reading frame 28, mRNA (cDNA clone IMAGE:5244108), complete cds PA
AK025310.1 Homo sapiens cDNA: FLJ21657 fis, clone COL08663 PA
NM_022483.4 Homo sapiens chromosome 5 open reading frame 28 (C5orf28), mRNA PA
BC119659.1 Homo sapiens chromosome 5 open reading frame 28, mRNA (cDNA clone MGC:149524 IMAGE:40115986), complete cds P
AK225220.1 Homo sapiens mRNA for hypothetical protein LOC64417 variant, clone: COL08663 P
BC119658.1 Homo sapiens chromosome 5 open reading frame 28, mRNA (cDNA clone MGC:149523 IMAGE:40115985), complete cds P
BC013351.2 Homo sapiens chromosome 5 open reading frame 28, mRNA (cDNA clone MGC:14939 IMAGE:3621124), complete cds PA
AK315466.1 Homo sapiens cDNA, FLJ96525 P
AK094078.1 Homo sapiens cDNA FLJ36759 fis, clone UTERU2018566

EST sequences (10 of 125) [Show all sequences]

AI097259.1 Clone IMAGE:1704498 brain 3' read A
AI337994.1 Clone IMAGE:1949970 uterus 3' read A
AI633495.1 Clone IMAGE:2122916 ovary 3' read A
R56106.1 Clone IMAGE:41174 brain 3' read A
AI742105.1 Clone IMAGE:2368398 mixed 3' read
AI761836.1 Clone IMAGE:2370122 mixed 3' read A
CB269553.1 adipose tissue 5' read P
CB984414.1 Clone IMAGE:30326960 mixed 5' read P
CB991679.1 Clone IMAGE:30333836 placenta 5' read
BX421153.2 Clone CS0DG001YJ16 uncharacterized tissue 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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