> SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae) (SLX1A)
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UGID:4541392     UniGene Hs.729791     Homo sapiens (human)   SLX1A Order cDNA clone, Links
SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae) (SLX1A)

Human protein-coding gene SLX1A. Represented by 13 ESTs from 12 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 4541392 - Hs.729791]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003960688.1 PREDICTED: structure-specific endonuclease subunit SLX1-like isoform 1 H. sapiens 100.0 353
NP_083696.2 Slx1b gene product M. musculus 77.5 266
NP_001090376.1 structure-specific endonuclease subunit slx1 X. laevis 55.6 270
XP_001337124.1 PREDICTED: structure-specific endonuclease subunit slx1-like D. rerio 52.0 252
NP_649484.3 nuclease slx1 D. melanogaster 45.5 189
Other hits (2 of 28) [Show all]SpeciesId(%)Len(aa)
XP_001109511.1 PREDICTED: structure-specific endonuclease subunit SLX1-like isoform 2 M. mulatta 97.1 274
XP_003916806.1 PREDICTED: structure-specific endonuclease subunit SLX1-like P. anubis 96.4 274

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: eye; brain; testis; blood; lymph node; prostate; esophagus
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p11.2
UniSTS entry: Chr 16 RH103211
UniSTS entry: Chr 16 RH133600
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

NM_001015000.2 Homo sapiens SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae) (SLX1A), transcript variant 2, mRNA PA
NM_001014999.2 Homo sapiens SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae) (SLX1A), transcript variant 1, mRNA PA
BC144462.1 Homo sapiens GIY-YIG domain containing 1, mRNA (cDNA clone MGC:178005 IMAGE:9052988), complete cds P

EST sequences (13)

AI885276.1 Clone IMAGE:2432324 brain 3' read PA
BX400125.2 Clone CS0DJ004YE17 blood 3' read P
BX400126.2 Clone CS0DJ004YE17 blood 5' read P
CD358777.1 Clone IMAGE:30387854 testis 5' read
CD673028.1 Clone fg19e11 eye 5' read P
CF135582.1 Clone IMAGE:3090230 lymph node 5' read
BP327621.1 Clone PRS07309 prostate 5' read P
BY797094.2 Clone HE2153.seq eye 5' read
DA374805.1 Clone BRTHA2005864 brain 5' read
DB012221.1 Clone TESOP2000527 esophagus 5' read P
BI757439.1 Clone IMAGE:5199834 brain 5' read P
BM927226.1 Clone IMAGE:5768190 brain 5' read
BY995308.1 Clone MCN1658 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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