Chromosome 3 open reading frame 80 (C3orf80)

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UGID:4541356 UniGene Hs.729755 Homo sapiens (human) C3orf80

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Chromosome 3 open reading frame 80 (C3orf80)

Human protein-coding gene C3orf80. Represented by 21 ESTs from 11 cDNA libraries. Corresponds to reference sequence NM_001168214.1. [UniGene 4541356 - Hs.729755]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
XP_003310120.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: uncharacterized membrane protein C3orf80 homolog	P. troglodytes	100.0	246
NP_001161686.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	uncharacterized membrane protein C3orf80 precursor	H. sapiens	100.0	246
NP_001161468.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	uncharacterized membrane protein C3orf80 homolog precursor	M. musculus	91.5	246
Other hits (2 of 6) [Show all]		Species	Id(%)	Len(aa)
XP_001093646.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: hypothetical protein LOC705274	M. mulatta	98.8	246
XP_003894939.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: uncharacterized membrane protein C3orf80 homolog, partial	P. anubis	98.8	161

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	brain; lung; kidney; uterus; eye

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	3
	Map position:	3q25.33

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	BC031660.1	Homo sapiens Similar to LOC166075, mRNA (cDNA clone IMAGE:5173621), partial cds	PA
	NM_001168214.1	Homo sapiens chromosome 3 open reading frame 80 (C3orf80), mRNA	PA

EST sequences (10 of 21) [Show all sequences]

AI694533.1	Clone IMAGE:2337137	lung	3' read
BX420254.2	Clone CS0DF025YH22	brain	5' read	P
BX413510.1	Clone CS0DF025YH22	brain	3' read
BX451607.2	Clone CS0DF025YH22	brain	5' read
BX450737.2	Clone CS0DF025YH22	brain	5' read
AW440782.1	Clone IMAGE:2899841	kidney
AW572052.1	Clone IMAGE:2792051	uterus	3' read	A
BE674005.1	Clone IMAGE:3278565	lung	3' read
BE674132.1	Clone IMAGE:3278805	lung	3' read
DA165390.1	Clone BRAMY2026398	brain	5' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria