BRWD1 intronic transcript 2 (non-protein coding) (BRWD1-IT2)

NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs

UGID:4541213 UniGene Hs.729612 Homo sapiens (human) BRWD1-IT2

Order cDNA clone, Links

BRWD1 intronic transcript 2 (non-protein coding) (BRWD1-IT2)

Human miscRNA gene BRWD1-IT2. Represented by 19 ESTs from 6 cDNA libraries. Corresponds to reference sequence NR_033800.1. [UniGene 4541213 - Hs.729612]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
XP_003949224.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: putative uncharacterized protein encoded by BRWD1-IT2-like	P. troglodytes	91.7	144

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	testis; lung; kidney; brain

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	21
Map position:	21q22.2
UniSTS entry:	Chr 21	REN20091
UniSTS entry:	Chr 21	REN20092
UniSTS entry:	Chr 21	RH104422
UniSTS entry:	Chr 21	ECD17433
UniSTS entry:	Chr 21	REN20093

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

BC130301.1	Homo sapiens chromosome 21 open reading frame 87, mRNA (cDNA clone MGC:163173 IMAGE:40146332), complete cds	P
BC130303.1	Homo sapiens chromosome 21 open reading frame 87, mRNA (cDNA clone MGC:163175 IMAGE:40146334), complete cds	P
AF426265.1	Homo sapiens C21orf87 protein (C21orf87) mRNA, complete cds	P
NR_033800.1	Homo sapiens BRWD1 intronic transcript 2 (non-protein coding) (BRWD1-IT2), non-coding RNA	P

EST sequences (10 of 19) [Show all sequences]

AA973521.1	Clone IMAGE:1569195	lung	3' read
AI632776.1	Clone IMAGE:2300043	kidney	3' read
AI942340.1	Clone IMAGE:2461608	kidney	3' read
AW000939.1	Clone IMAGE:2494975	kidney	3' read
BF437972.1	Clone IMAGE:3703014	lung	3' read
BF439778.1	Clone IMAGE:3365511	lung	3' read
DB096650.1	Clone TESTI4047696	testis	5' read
DB443472.1	Clone H013010F18	testis	5' read	P
DB508410.1	Clone H013010F18	testis	3' read
BI830783.1	Clone IMAGE:5167340	brain	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria