> Major histocompatibility complex, class I, H (pseudogene) (HLA-H)
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UGID:4540409     UniGene Hs.728808     Homo sapiens (human)   HLA-H Links
Major histocompatibility complex, class I, H (pseudogene) (HLA-H)

Human pseudo gene HLA-H. Represented by 39 ESTs from 31 cDNA libraries. EST representation biased toward adult. Corresponds to reference sequence NR_001434.2. [UniGene 4540409 - Hs.728808]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_002107.3 HLA-A gene product H. sapiens 90.7 364
NP_001254737.1 histocompatibility 2, D region locus L M. musculus 71.2 357
Other hits (2 of 14) [Show all]SpeciesId(%)Len(aa)
NP_001009058.2 PATR-A gene product P. troglodytes 89.6 364
NP_001041711.2 major histocompatibility complex, class I, A precursor M. mulatta 88.5 364

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: adult [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: spleen; placenta; adrenal gland; uncharacterized tissue; brain; intestine; uterus; thyroid; blood; liver; larynx; lung; prostate; heart; thymus; bone; stomach; connective tissue; ovary; mixed
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6p21.3
UniSTS entry: Chr 6 RH70531 [Map Viewer]
UniSTS entry: Chr 6 PMC155279P1
UniSTS entry: GDB:454124
UniSTS entry: Chr 6 RH66830 [Map Viewer]
UniSTS entry: Chr 6 RH80801
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

AK309163.1 Homo sapiens cDNA, FLJ99204 P
AK308374.1 Homo sapiens cDNA, FLJ98322 P
AK309480.1 Homo sapiens cDNA, FLJ99521 P
AK090500.1 Homo sapiens cDNA FLJ33181 fis, clone ADRGL2003684, highly similar to HLA class I histocompatibility antigen, alpha chain H precursor P
AK300878.1 Homo sapiens cDNA FLJ53565 complete cds, moderately similar to HLA class I histocompatibility antigen, alpha chain H precursor P
AK293556.1 Homo sapiens cDNA FLJ53543 complete cds, moderately similar to HLA class I histocompatibility antigen, alpha chain H precursor P
AK299998.1 Homo sapiens cDNA FLJ52667 complete cds, highly similar to HLA class I histocompatibility antigen, alpha chain H precursor P
NR_001434.2 Homo sapiens major histocompatibility complex, class I, H (pseudogene) (HLA-H), non-coding RNA PA

EST sequences (10 of 39) [Show all sequences]

AI564342.1 Clone IMAGE:2212645 uterus 3' read A
AW806530.1 stomach P
BE304797.1 Clone IMAGE:3051425 intestine 5' read P
BE774141.1 uterus
AV688189.1 Clone GKCFPF08 liver 5' read
DR006526.1 Clone TC107173 spleen 5' read P
CR998363.1 Clone RZPDp9017K1629 uncharacterized tissue 5' read P
T29457.1 placenta 5' read
DA011660.1 Clone ADRGL2003684 adrenal gland 5' read P
DA091490.1 Clone BRACE2047482 brain 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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