> Heat shock 60kDa protein 1 (chaperonin) (HSPD1)
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UGID:4409945     UniGene Hs.727543     Homo sapiens (human)   HSPD1 Links
Heat shock 60kDa protein 1 (chaperonin) (HSPD1)

Human protein-coding gene HSPD1. Represented by 2684 ESTs from 507 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 4409945 - Hs.727543]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001169249.1 PREDICTED: 60 kDa heat shock protein, mitochondrial isoform 8 P. troglodytes 100.0 572
NP_002147.2 HSPD1 gene product H. sapiens 100.0 572
XP_001086546.2 PREDICTED: 60 kDa heat shock protein, mitochondrial isoform 1 M. mulatta 99.8 572
XP_003907747.1 PREDICTED: 60 kDa heat shock protein, mitochondrial-like P. anubis 99.7 572
NP_034607.3 Hspd1 gene product M. musculus 99.3 572
NP_001083970.1 heat shock 60kDa protein 1 (chaperonin) X. laevis 94.7 578
NP_851847.1 hspd1 gene product D. rerio 92.5 574
NP_511115.2 heat shock protein 60, isoform A D. melanogaster 82.7 572
NP_497429.1 Protein HSP-60, isoform a C. elegans 78.7 567
NP_189041.1 chaperonin CPN60 A. thaliana 65.3 574
XP_956500.2 heat shock protein 60, mitochondrial precursor N. crassa 62.2 489
XP_001691353.1 chaperonin 60C C. reinhardtii 61.9 528
NP_013360.1 chaperone ATPase HSP60 S. cerevisiae 61.5 563
Other hits (2 of 60) [Show all]SpeciesId(%)Len(aa)
XP_003434337.1 PREDICTED: 60 kDa heat shock protein, mitochondrial C. lupus familiaris 99.5 572
XP_002712414.1 PREDICTED: chaperonin O. cuniculus 99.5 572

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; kidney; liver; testis; intestine; embryonic tissue; lung; adrenal gland; blood; uterus; skin; mixed; placenta; prostate; eye; vascular; muscle; bone marrow; thymus; ascites; mammary gland; heart; connective tissue; lymph; stomach; ovary; esophagus; cervix; bladder; pituitary gland; pancreas; lymph node; spleen; trachea; mouth; thyroid; bone; pharynx; adipose tissue; ear; nerve; umbilical cord; salivary gland; larynx; spinal cord; ganglia; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2q33.1
UniSTS entry: Chr 2 RH67923
UniSTS entry: Chr 2 RH69100
UniSTS entry: Chr 2 G06434
UniSTS entry: Chr 2 STS-AA015752
UniSTS entry: Chr 2 L28220
UniSTS entry: Chr 11 A002D21 [Map Viewer]
UniSTS entry: Chr 11 WI-14149 [Map Viewer]
UniSTS entry: Chr 1 D10S16
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

NM_002156.4 Homo sapiens heat shock 60kDa protein 1 (chaperonin) (HSPD1), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA PA
NM_199440.1 Homo sapiens heat shock 60kDa protein 1 (chaperonin) (HSPD1), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA PA
AK301276.1 Homo sapiens cDNA FLJ52281 complete cds, highly similar to 60 kDa heat shock protein, mitochondrial precursor P
AK298844.1 Homo sapiens cDNA FLJ51046 complete cds, highly similar to 60 kDa heat shock protein, mitochondrial precursor P
AK298632.1 Homo sapiens cDNA FLJ54373 complete cds, highly similar to 60 kDa heat shock protein, mitochondrial precursor P
AK298368.1 Homo sapiens cDNA FLJ51028 complete cds, highly similar to 60 kDa heat shock protein, mitochondrial precursor P
AK297305.1 Homo sapiens cDNA FLJ54912 complete cds, highly similar to 60 kDa heat shock protein, mitochondrial precursor P

EST sequences (10 of 2684) [Show all sequences]

AA903268.1 Clone IMAGE:1517305 uncharacterized tissue 3' read A
AA903270.1 Clone IMAGE:1517309 uncharacterized tissue 3' read A
AA905317.1 Clone IMAGE:1506520 mixed 3' read A
AA970965.1 Clone IMAGE:1575243 kidney 3' read A
AA971284.1 Clone IMAGE:1574923 kidney 3' read A
AA978125.1 Clone IMAGE:1578551 mixed 3' read A
AA989149.1 Clone IMAGE:1593504 kidney 3' read A
AI023089.1 Clone IMAGE:1650518 parathyroid 3' read A
AI061347.1 Clone IMAGE:1700785 kidney 3' read A
AI061425.1 Clone IMAGE:1700115 kidney 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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