> Centromere protein N (CENPN)
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UGID:4269764     UniGene Hs.726537     Homo sapiens (human)   CENPN Order cDNA clone, Links
Centromere protein N (CENPN)

Human protein-coding gene CENPN. Represented by 206 ESTs from 114 cDNA libraries. Corresponds to 5 reference sequences (different isoforms). [UniGene 4269764 - Hs.726537]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001094095.2 CENPN gene product H. sapiens 100.0 352
NP_082407.1 centromere protein N M. musculus 77.5 336
NP_001088250.1 centromere protein N-A X. laevis 53.7 335
Other hits (2 of 16) [Show all]SpeciesId(%)Len(aa)
XP_001145901.1 PREDICTED: centromere protein N isoform 1 P. troglodytes 99.4 352
XP_003917273.1 PREDICTED: centromere protein N, partial P. anubis 97.9 282

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: prostate; mixed; bone marrow; thyroid; eye; mammary gland; mouth; brain; uncharacterized tissue; embryonic tissue; lymph node; cervix; placenta; lung; umbilical cord; liver; skin; adrenal gland; pancreas; blood; parathyroid; ascites; kidney; uterus; intestine; testis; heart; muscle; bone; ovary
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16q23.2
UniSTS entry: Chr 16 RH99185
UniSTS entry: Chr 1 L18441
UniSTS entry: Chr 4 D11S2687
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (13)

NM_018455.5 Homo sapiens centromere protein N (CENPN), transcript variant 3, mRNA PA
AK023669.1 Homo sapiens cDNA FLJ13607 fis, clone PLACE1010624, highly similar to Homo sapiens bone marrow protein BM039 (BM039), mRNA P
AK026313.1 Homo sapiens cDNA: FLJ22660 fis, clone HSI07975, highly similar to AF217515 Homo sapiens uncharacterized bone marrow protein BM039 mRNA PA
BC007334.2 Homo sapiens centromere protein N, mRNA (cDNA clone MGC:15098 IMAGE:3830110), complete cds PA
BC008972.1 Homo sapiens centromere protein N, mRNA (cDNA clone MGC:9498 IMAGE:3048151), complete cds PA
NM_001100625.2 Homo sapiens centromere protein N (CENPN), transcript variant 1, mRNA PA
NM_001100624.2 Homo sapiens centromere protein N (CENPN), transcript variant 2, mRNA PA
AK298554.1 Homo sapiens cDNA FLJ60781 complete cds, highly similar to Homo sapiens bone marrow protein BM039 (BM039), mRNA P
AK296024.1 Homo sapiens cDNA FLJ54933 complete cds, highly similar to Homo sapiens bone marrow protein BM039 (BM039), mRNA PA
AF217515.1 Homo sapiens uncharacterized bone marrow protein BM039 mRNA, complete cds PA
NM_001270474.1 Homo sapiens centromere protein N (CENPN), transcript variant 5, mRNA PA
NM_001270473.1 Homo sapiens centromere protein N (CENPN), transcript variant 4, mRNA PA
BC039021.2 Homo sapiens cDNA clone IMAGE:6043059, partial cds A

EST sequences (10 of 206) [Show all sequences]

AA978150.1 Clone IMAGE:1273818 bone
AI016110.1 Clone IMAGE:1623755 embryonic tissue 3' read A
AI089002.1 Clone IMAGE:1634855 mixed 3' read A
AI143746.1 Clone IMAGE:1705949 heart 3' read A
AI160200.1 Clone IMAGE:1705209 heart 3' read A
BX093876.1 Clone IMAGp998P104330_;_IMAGE:1705209 heart A
CB145682.1 Clone L16HLK3-9-D01 liver 5' read P
CB115703.1 Clone L8SCK0-8-C09 liver 5' read
CB140392.1 Clone L15CKK1-9-B03 liver 5' read
AI086244.1 Clone IMAGE:1656053 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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