> Adhesion molecule with Ig-like domain 1 (AMIGO1)
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UGID:4269706     UniGene Hs.726479     Homo sapiens (human)   AMIGO1 Order cDNA clone, Links
Adhesion molecule with Ig-like domain 1 (AMIGO1)

Human protein-coding gene AMIGO1. Represented by 27 ESTs from 20 cDNA libraries. Corresponds to reference sequence NM_020703.2. [UniGene 4269706 - Hs.726479]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_002801737.1 PREDICTED: amphoterin-induced protein 1 isoform 2 M. mulatta 100.0 492
XP_003892379.1 PREDICTED: amphoterin-induced protein 1 isoform 1 P. anubis 100.0 492
XP_001150542.1 PREDICTED: amphoterin-induced protein 1 isoform 1 P. troglodytes 100.0 492
NP_065754.2 AMIGO1 gene product H. sapiens 100.0 492
NP_001004293.1 Amigo1 gene product M. musculus 91.7 491
XP_001924023.1 PREDICTED: amphoterin-induced protein 1 D. rerio 60.6 476
Other hits (2 of 15) [Show all]SpeciesId(%)Len(aa)
XP_547241.2 PREDICTED: amphoterin-induced protein 1 C. lupus familiaris 96.8 492
NP_001094589.1 AMIGO1 gene product B. taurus 96.3 492

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; eye; thymus; uncharacterized tissue; prostate; kidney; trachea; thyroid; mixed; ovary; bone; testis
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p13.3
UniSTS entry: Chr 1 WI-12158 [Map Viewer]
UniSTS entry: Chr 1 SHGC-75264 [Map Viewer]
UniSTS entry: Chr 1 RH26161
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

AY237007.1 Homo sapiens transmembrane protein AMIGO (AMIGO) mRNA, complete cds P
AB032989.1 Homo sapiens mRNA for KIAA1163 protein, partial cds P
NM_020703.2 Homo sapiens adhesion molecule with Ig-like domain 1 (AMIGO1), mRNA PA
AK295678.1 Homo sapiens cDNA FLJ50013 complete cds, highly similar to Amphoterin-induced protein 1 precursor P
BC040879.1 Homo sapiens adhesion molecule with Ig-like domain 1, mRNA (cDNA clone MGC:50479 IMAGE:5725643), complete cds PA

EST sequences (10 of 27) [Show all sequences]

AI392736.1 Clone IMAGE:2109642 uncharacterized tissue 3' read A
BX415700.2 Clone CS0CAP007YD13 thymus 5' read P
CD673013.1 Clone fg19d05 eye 5' read P
DR003632.1 Clone TC121804 brain 5' read P
DR003500.1 Clone TC107083 brain 5' read P
DR006126.1 Clone TC102552 prostate 5' read P
DA093014.1 Clone BRACE3001602 brain 5' read
DA126275.1 Clone BRACE3049234 brain 5' read P
DA322205.1 Clone BRHIP3015753 brain 5' read P
DA246034.1 Clone BRAWH3044857 brain 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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