> HOXA cluster antisense RNA 2 (HOXA-AS2)
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UGID:3880905     UniGene Hs.721126     Homo sapiens (human)   HOXA-AS2 Links
HOXA cluster antisense RNA 2 (HOXA-AS2)

Human putative protein-coding gene HOXA-AS2. Represented by 18 ESTs from 14 cDNA libraries. EST representation biased toward colorectal tumor. [UniGene 3880905 - Hs.721126]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003318326.2 PREDICTED: uncharacterized protein LOC100615497 P. troglodytes 66.9 124

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: colorectal tumor [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: intestine; kidney; mixed; uterus; connective tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 7
Map position: 7p15.2
UniSTS entry: Chr 7 REN100454
UniSTS entry: Chr 7 REN100430
UniSTS entry: Chr 7 REN100436
UniSTS entry: Chr 7 REN100453
UniSTS entry: Chr 7 REN100433
UniSTS entry: Chr 7 REN100434
UniSTS entry: Chr 7 REN100435
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (1)

BC035889.2 Homo sapiens hypothetical protein LOC285943, mRNA (cDNA clone IMAGE:5180590), partial cds A

EST sequences (10 of 18) [Show all sequences]

AI277552.1 Clone IMAGE:1880278 mixed 3' read
AI282089.1 Clone IMAGE:1899879 kidney 3' read A
AI702927.1 Clone IMAGE:2296354 kidney 3' read
AW083288.1 Clone IMAGE:2583620 intestine 3' read
AW751065.1 intestine
AW844933.1 intestine
BE873349.1 Clone IMAGE:3854449 intestine 5' read
DA631315.1 Clone KIDNE2012688 kidney 5' read
BF591467.1 Clone IMAGE:3320130 intestine 3' read
DB352501.1 Clone UTERU3008003 uterus 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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