> Potassium channel tetramerisation domain containing 9 (KCTD9)
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UGID:139458     UniGene Hs.72071     Homo sapiens (human)   KCTD9 Order cDNA clone, Links
Potassium channel tetramerisation domain containing 9 (KCTD9)

Human protein-coding gene KCTD9. Represented by 143 ESTs from 97 cDNA libraries. Corresponds to reference sequence NM_017634.3. [UniGene 139458 - Hs.72071]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001107534.1 PREDICTED: BTB/POZ domain-containing protein KCTD9-like isoform 1 M. mulatta 100.0 388
XP_001161064.1 PREDICTED: BTB/POZ domain-containing protein KCTD9 isoform 2 P. troglodytes 100.0 388
NP_060104.2 KCTD9 gene product H. sapiens 100.0 388
XP_003902608.1 PREDICTED: BTB/POZ domain-containing protein KCTD9, partial P. anubis 100.0 320
NP_001095739.1 KCTD9 gene product B. taurus 100.0 274
XP_003132863.3 PREDICTED: BTB/POZ domain-containing protein KCTD9 S. scrofa 99.7 388
XP_543235.3 PREDICTED: BTB/POZ domain-containing protein KCTD9 C. lupus familiaris 99.7 376
NP_001104498.1 BTB/POZ domain-containing protein KCTD9 isoform a M. musculus 99.2 388
NP_001013585.2 potassium channel tetramerisation domain containing 9 D. rerio 93.3 388
NP_001091383.1 potassium channel tetramerisation domain containing 9 X. laevis 93.3 388
NP_649465.6 CG14647 D. melanogaster 62.5 300
Other hits (2 of 28) [Show all]SpeciesId(%)Len(aa)
XP_004004227.1 PREDICTED: BTB/POZ domain-containing protein KCTD9 O. aries 99.5 388
XP_002709508.1 PREDICTED: potassium channel tetramerisation domain containing 9 O. cuniculus 99.5 388

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: liver; blood; mammary gland; skin; connective tissue; ovary; eye; vascular; kidney; spleen; bladder; brain; mixed; testis; uncharacterized tissue; uterus; muscle; embryonic tissue; prostate; intestine; pancreas; placenta; esophagus; adrenal gland; trachea; salivary gland; lung; bone marrow; stomach; bone; nerve; ascites; ganglia; pituitary gland; cervix; lymph node
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 8
Map position: 8p21.1
UniSTS entry: Chr 8 RH66133
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

BC068518.1 Homo sapiens potassium channel tetramerisation domain containing 9, mRNA (cDNA clone MGC:87312 IMAGE:5265435), complete cds PA
AK000045.1 Homo sapiens cDNA FLJ20038 fis, clone COL00324 PA
NM_017634.3 Homo sapiens potassium channel tetramerisation domain containing 9 (KCTD9), mRNA PA
AK025995.1 Homo sapiens cDNA: FLJ22342 fis, clone HRC06038 A
AF075015.1 Homo sapiens full length insert cDNA YI24C02

EST sequences (10 of 143) [Show all sequences]

AI074938.1 Clone IMAGE:1664879 skin 3' read A
AI080327.1 Clone IMAGE:1662619 mixed 3' read A
AI088032.1 Clone IMAGE:1651250 mixed 3' read A
AI125289.1 Clone IMAGE:1736937 testis 3' read A
AI125769.1 Clone IMAGE:1736853 testis 3' read A
CB045222.1 Clone IMAGE:3218240 intestine 3' read A
AI147176.1 Clone IMAGE:1510120 mixed 3' read
BX099138.1 Clone IMAGp998O131170_;_IMAGE:491748 uterus
AI168221.1 Clone IMAGE:1509309 mixed 3' read A
CB121409.1 Clone L7N800102s1-1-B02 liver 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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