> RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2 (RRN3P2)
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UGID:3880127     UniGene Hs.720348     Homo sapiens (human)   RRN3P2 Links
RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2 (RRN3P2)

Human pseudo gene RRN3P2. Represented by 268 ESTs from 97 cDNA libraries. Corresponds to reference sequence NR_003369.2. [UniGene 3880127 - Hs.720348]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_060897.3 RRN3 gene product H. sapiens 96.5 650
NP_001034610.1 RNA polymerase I-specific transcription initiation factor RRN3 M. musculus 92.2 650
NP_001107876.1 RRN3 RNA polymerase I transcription factor homolog X. laevis 75.0 609
XP_706962.2 PREDICTED: hypothetical protein isoform 2 D. rerio 66.2 603
Other hits (2 of 29) [Show all]SpeciesId(%)Len(aa)
XP_001143837.2 PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 isoform 1 P. troglodytes 95.5 551
XP_003916621.1 PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 isoform 2 P. anubis 95.2 620

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; trachea; liver; connective tissue; mammary gland; uterus; muscle; skin; lung; bladder; vascular; intestine; placenta; uncharacterized tissue; thymus; embryonic tissue; stomach; kidney; mouth; prostate; spleen; blood; esophagus; eye; adrenal gland; nerve; lymph node; adipose tissue; lymph; mixed
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p11.2
UniSTS entry: RH103343
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

AK225670.1 Homo sapiens mRNA for RRN3 RNA polymerase I transcription factor homolog, clone: SYN01082 PA
AK301253.1 Homo sapiens cDNA FLJ56774 complete cds, highly similar to RNA polymerase I-specific transcription initiation factor RRN3 P
AK298442.1 Homo sapiens cDNA FLJ60768 complete cds, moderately similar to RNA polymerase I-specific transcriptioninitiation factor RRN3 P
NR_003369.2 Homo sapiens RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2 (RRN3P2), non-coding RNA PA

EST sequences (10 of 268) [Show all sequences]

AI125359.1 Clone IMAGE:1736568 testis 3' read
BX105065.1 Clone IMAGp998I055408_;_IMAGE:2188492 stomach A
AI468181.1 Clone IMAGE:2112770 prostate 3' read
AI799954.1 Clone IMAGE:2321187 prostate 3' read P
CB266771.1 adipose tissue 5' read P
BX281905.1 Clone IMAGp998G226859_;_IMAGE:2773293 kidney
AI919492.1 Clone IMAGE:2188490 stomach 3' read
AI919493.1 Clone IMAGE:2188492 stomach 3' read
AI928274.1 Clone IMAGE:2460398 prostate 3' read P
AW002897.1 Clone IMAGE:2480394 uncharacterized tissue 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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