> Neural proliferation, differentiation and control, 1 (NPDC1)
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UGID:3879685     UniGene Hs.719906     Homo sapiens (human)   NPDC1 Order cDNA clone, Links
Neural proliferation, differentiation and control, 1 (NPDC1)

Human protein-coding gene NPDC1. Represented by 509 ESTs from 184 cDNA libraries. Corresponds to reference sequence NM_015392.3. [UniGene 3879685 - Hs.719906]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_056207.3 NPDC1 gene product H. sapiens 100.0 324
XP_003217500.1 PREDICTED: 40S ribosomal protein S14-like A. carolinensis 100.0 108
XP_003970897.1 PREDICTED: 40S ribosomal protein S14-like isoform 1 T. rubripes 100.0 108
NP_001187077.1 40S ribosomal protein S14 I. punctatus 100.0 108
XP_004076697.1 PREDICTED: 40S ribosomal protein S14-like isoform 1 O. latipes 100.0 108
XP_003457062.1 PREDICTED: 40S ribosomal protein S14-like O. niloticus 100.0 108
NP_001080235.1 40S ribosomal protein S14 X. laevis 100.0 108
NP_001016722.1 LOC549476 gene product X. tropicalis 100.0 108
XP_003210455.1 PREDICTED: 40S ribosomal protein S14-like isoform 1 M. gallopavo 100.0 108
XP_001503764.1 PREDICTED: 40S ribosomal protein S14-like E. caballus 100.0 108
XP_004009023.1 PREDICTED: 40S ribosomal protein S14 isoform 1 O. aries 100.0 108
NP_956320.1 rps14 gene product D. rerio 99.1 108
NP_032747.2 Npdc1 gene product M. musculus 84.9 331
XP_001697388.1 ribosomal protein S14, component of cytosolic 80S ribosome and 40S small subunit C. reinhardtii 83.6 110
NP_498572.1 Protein RPS-14 C. elegans 82.6 109
NP_524884.1 ribosomal protein S14a, isoform B D. melanogaster 82.4 108
XP_962951.1 40S ribosomal protein S14 N. crassa 82.2 107
NP_009960.2 ribosomal 40S subunit protein S14A S. cerevisiae 80.9 89
NP_181158.1 40S ribosomal protein S14-1 A. thaliana 80.4 107
Other hits (2 of 50) [Show all]SpeciesId(%)Len(aa)
NP_001133208.1 ribosomal protein S14-2 S. salar 99.1 108
XP_002713077.1 PREDICTED: ribosomal protein S14-like O. cuniculus 98.3 115

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; pancreas; uterus; testis; prostate; embryonic tissue; cervix; stomach; skin; vascular; mixed; lung; uncharacterized tissue; intestine; placenta; thyroid; eye; kidney; pituitary gland; ovary; heart; nerve; larynx; spleen; ascites; connective tissue; bone; blood; mouth; liver; ganglia; pineal gland; adipose tissue; mammary gland; adrenal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9q34.3
UniSTS entry: Chr 9 WI-15356 [Map Viewer]
UniSTS entry: Chr 1 D10S16
UniSTS entry: Chr 1 D5S1606E
UniSTS entry: Chr 1 D11S2921
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

AL050221.1 Homo sapiens mRNA; cDNA DKFZp586J0523 (from clone DKFZp586J0523); partial cds PA
AF272357.1 Homo sapiens NPDC1-like protein (NPDC1) mRNA, complete cds PA
AF283247.1 Homo sapiens NPDC-1 mRNA, partial cds PA
NM_015392.3 Homo sapiens neural proliferation, differentiation and control, 1 (NPDC1), mRNA PA
AK225091.1 Homo sapiens mRNA for Neural proliferation differentiation and control protein 1 precursor variant, clone: CAS08969 PA
AF285836.1 Homo sapiens NPDC1 protein (NPDC1) mRNA, complete cds PA
BC004217.2 Homo sapiens neural proliferation, differentiation and control, 1, mRNA (cDNA clone MGC:4597 IMAGE:3347743), complete cds PA
AK054950.1 Homo sapiens cDNA FLJ30388 fis, clone BRACE2008251, highly similar to Homo sapiens NPDC-1 mRNA P
AF327349.1 Homo sapiens NPDC-1 protein mRNA, complete cds PA
AK074793.1 Homo sapiens cDNA FLJ90312 fis, clone NT2RP2001276, moderately similar to NPDC-1 PROTEIN PRECURSOR P

EST sequences (10 of 509) [Show all sequences]

AA905571.1 Clone IMAGE:1506247 mixed 3' read A
AA904818.1 Clone IMAGE:1504465 mixed 3' read
T05793.1 Clone HFBDG48 brain
AI094479.1 Clone IMAGE:1670485 brain 3' read A
AI139320.1 Clone IMAGE:1710220 uterus 3' read A
AI254713.1 Clone IMAGE:1962417 intestine 3' read A
CB153286.1 Clone B1T694954-31-A11 brain 5' read P
CB154619.1 Clone B2N807043-29-C06 brain 5' read
CB142412.1 Clone L15CKK1-23-B04 liver 5' read
AI289074.1 Clone IMAGE:1992788 uterus 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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